Prunus avium (sweet cherry): 110745970
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Entry
110745970 CDS
T05161
Name
(RefSeq) F-box protein SKP2A-like
KO
K03875
F-box and leucine-rich repeat protein 1 (S-phase kinase-associated protein 2)
Organism
pavi
Prunus avium (sweet cherry)
Pathway
pavi04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
pavi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
110745970
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pavi04121
]
110745970
Ubiquitin system [BR:
pavi04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
110745970
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_6
LRR_4
LRR_At5g56370
F-box-like
F-box
LRR_Zer-1
LRR_8
LRR_At1g61320_AtMIF1
Motif
Other DBs
NCBI-GeneID:
110745970
NCBI-ProteinID:
XP_021801841
UniProt:
A0A6P5RG87
LinkDB
All DBs
Position
Unknown
AA seq
380 aa
AA seq
DB search
MVGKENFKTEDLNLCFEKLMMFGGGSAGAIAIGGGKVKMEGRAITDWKDIPMELLLQILG
LVDDQTVIMASGVCRGWRDAVCLGLTRLSLTWCTKNMNNLVLSLAPKFRRLQTLILRQDK
KAQLEDDAVESIANFCHDLQVLDLSKSFNLSDRSLYALAHGCPNLTKLNISGCTAFSDSA
LEYLASFCQKLKVLNLCGCVGTASDRALQAIGRYCSQLQCLNLGWCEDISDVGVMSLAYG
CPDLRTVDLCNCVQITDDSVIALANRCPHLRSLGLYYCQNITDRAMYSLAQSLVRNKPAA
VWESRKPKNDEEGLRTLNISQCTALTPSAVQAVCDSFPALHTCSGRHSLIMSGCLNLTSV
HCACAVQAHRTASAFPHSAH
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atggtaggaaaagaaaacttcaagactgaagacttgaacttgtgctttgagaaactcatg
atgtttggtggtggtagtgctggtgctattgctattggtggtggaaaagtgaaaatggaa
ggaagggctattactgattggaaggatattcccatggaactcctgttgcaaatccttgga
cttgtcgatgatcagacggtgatcatggcttctggagtctgtcgtggctggagagatgct
gtttgcttgggccttacccgtctctccctcacatggtgcaccaagaacatgaacaacttg
gtcctgtctcttgctcctaagtttagaagattgcagactctaatactacgtcaagataaa
aaagctcaacttgaggacgatgctgttgagagtattgcaaacttctgtcatgatctgcag
gtcctggacctcagcaaaagcttcaacctcagtgaccgctctctgtatgccttagctcat
gggtgccctaatcttacaaaactcaacattagcgggtgtacagccttcagtgacagtgct
cttgagtatctggctagcttttgccaaaaattgaaagttctgaatctttgtggatgtgtc
ggaactgcatcagacagggcattgcaggctattggtcgttattgcagtcagttgcagtgt
ctgaatcttggttggtgcgaggatataagtgatgttggagttatgagcttggcatatgga
tgccctgatctcagaaccgttgatttgtgtaactgtgtccaaataacagatgacagtgtg
attgctttggcaaacaggtgccctcatctgagatcccttggcctttattactgtcagaac
attacagacagagcaatgtattctttggcccagagtttagtgaggaacaagcctgcagca
gtgtgggaatctaggaaacccaagaatgatgaggaagggctcaggactctcaacatcagc
caatgcacagcgctcaccccttctgctgttcaggcggtgtgcgactcatttcccgcactt
catacctgctctggaaggcattccctcattatgagcggctgtttgaacttgacatccgtg
cattgtgcctgtgctgtccaagcacaccgcacggcaagcgcctttcctcattcggctcat
tga
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