Prunus avium (sweet cherry): 110746089
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Entry
110746089 CDS
T05161
Name
(RefSeq) protein HIRA isoform X1
KO
K11293
protein HIRA/HIR1
Organism
pavi
Prunus avium (sweet cherry)
Brite
KEGG Orthology (KO) [BR:
pavi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pavi03036
]
110746089
Chromosome and associated proteins [BR:
pavi03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
110746089
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_CAF1B_HIR1
Hira
WD40
WD40_CDC20-Fz
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_TEP1_2nd
EIF3I
ANAPC4_WD40
WDR55
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR35_TULP_N
Beta-prop_IFT122_1st
Beta-prop_IFT140_1st
Beta-prop_WDR75_1st
NBCH_WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR19_1st
Beta-prop_EML
Beta-prop_SCAP
FUSC
R3H-assoc
Motif
Other DBs
NCBI-GeneID:
110746089
NCBI-ProteinID:
XP_021801992
UniProt:
A0A6P5RGN3
LinkDB
All DBs
Position
Unknown
AA seq
1031 aa
AA seq
DB search
MIAEKPSWIRHEGMQIFSIDVQPGGLRLATGGGDHKVRVWNMKSLGRDLENEESSQRLLA
TLRDHFGSVNCVRWAKHGRYVASGSDDQVILIHERKPGSGTTEFGSGEPPDVENWKVAMT
LRGHTADVVDLNWSPDDSMLASGSLDNTIHIWNMSNGICTAVLRGHSSLVKGVTWDPIGS
FIASQSDDKTVIIWRTSDWSLAHRTDGHWAKSLGSTFFRRLGWSPCGHFITTTHGFQKPR
HSAPVLERGEWSATFDFLGHNAPVIVVKFNHSMFRRNISNAQEKAAPVGWTNGASKMGGK
EKEPQPYNVIAIGSQDRTITVWTTASPRPLFVAKHFFTQSVVDLSWSPDGYSLFACSLDG
SVATFHFEVKELGNRLTDAELDELKRNRYGDVRGRQANLAESPAQLLLEAASAKQAPSKK
VVLDQQNQTVVKPSVDARVATKTSVDGLNKASLSARISSPVKQREYRRPDGRKRIIPEAV
GVPLQQENISVGAQSQALDFPPMHSDKKNDDNGLAAADSGIRDSSVRGTLGRSTEIKEGH
GVTARAMITKSLVIEKVTASTGRDESITVEQSGNAKASSSLGASCSTLSIRVFDKKEGED
TVPICLEAQPREQAANDIVGIGNTFIMKETEITCTRGLQTLWSDRISGKVTVLAGNANFW
AVGCEDGCIQVYTKCGRRAMPTMMVGSAAIFIDCDECWKLFLVTRKGSFYVWDLFKRNCL
LHDSLASLVASNPNPSAKDAGVIKVISAKLSRSGSPLVVLATRHAFLFDMGLMCWLRVAD
DCFPGSNFSSSWHSGSTQSGELAALQVDVRKYVARKPGWSRVTDDGVQTRAHLEAQLASS
LALKSPKDYRQCLLSYIRFLAREADESRLREVCESFLGPPTGMVEDTPSDPKNLAWDPYV
LGMRKHKLLREDILPAMASNRKVQRLLNEFMDLISEYESAETNLEKRSQTSPIACPPAAD
QMEAAPSGTNQKDSVPAATDQKKSVPASIDEKDSSELAADKENSAQAAEDTVNSDPQMIN
QVSLAPQDAGS
NT seq
3096 nt
NT seq
+upstream
nt +downstream
nt
atgattgcagagaagcccagttggattaggcacgagggaatgcaaattttctccattgat
gttcagcctggtggacttaggctggccactggtgggggtgaccacaaggtgcgagtatgg
aacatgaaatcccttggcagggatttggaaaatgaagaatcatcccagaggctacttgca
actctccgtgatcactttggctctgtgaactgtgttaggtgggctaagcatggtaggtat
gttgcttcaggatctgatgatcaagtgattctaattcatgagaggaagcctggttcagga
accactgagtttggtagtggggagccccctgatgttgagaattggaaagttgcaatgact
ttgagagggcatactgcagatgtggtggatcttaattggtctccagatgactcgatgttg
gccagtggaagtttagataacactatacacatctggaatatgagcaatggtatttgcact
gctgttctaaggggtcactctagcctggttaaaggagttacttgggatccaattggttca
tttatagcaagtcaatcagatgataagactgtaattatttggcgaacaagcgactggagt
cttgctcacaggacagacggccactgggcaaaatcacttggatctacctttttcaggcgg
ctgggatggtccccttgtggccacttcattactaccactcacgggttccagaaaccaagg
cattctgcacctgtcctagagagaggggaatggtctgccacatttgacttcttaggacat
aatgcccccgtgatcgtagtgaagtttaatcattcaatgtttaggaggaatatttccaat
gctcaggaaaaagcagcacctgtggggtggactaatggggcttcaaagatgggtgggaaa
gagaaagaaccacaaccttataatgtcattgcaattgggagtcaggatagaaccataact
gtctggacaactgcaagtccccgccctctctttgtagcaaagcatttctttactcaaagt
gttgtggatttatcctggagccctgatggttattcactttttgcatgttctttggatggg
tcagtggctactttccattttgaggtgaaagagcttggcaataggttaactgatgctgaa
ctggatgaattgaagagaaatcgttatggtgatgttagaggtcggcaagcaaatttagca
gaaagcccagcacagttattgcttgaagcagcctctgccaagcaagccccaagcaaaaaa
gtggttctggatcagcaaaaccagacagttgtaaaaccttctgttgatgcaagggttgca
acaaaaacttctgttgatggtttaaataaggcttcattgtctgccagaatttctagtcct
gtgaagcagagggaatatagacggcctgatggtagaaagaggattattccagaagctgtt
ggggtgcctctccagcaggaaaatatatctgttggggctcagtcgcaggctcttgacttc
cctcctatgcattctgataaaaaaaatgatgataatgggttagccgctgctgatagtggc
attagagacagttctgttaggggaacacttggtaggagcactgaaataaaggagggacat
ggggtcactgctagagctatgattaccaaaagcctagttattgagaaggttaccgcatcc
acaggcagggatgaaagcataactgtggagcagtcaggaaatgccaaggcttctagttcg
ctaggcgcttcttgttccactctttcaattagggtgttcgataagaaagaaggggaagat
actgtaccaatttgcttggaagctcaaccccgagaacaagctgcaaacgacattgttggc
ataggaaatacatttatcatgaaagaaacagaaattacttgcacaagggggttgcaaact
ctttggtcggataggatatctgggaaagtcactgttttagctggaaatgcaaacttctgg
gctgttggctgtgaggatggatgcatacaggtttacacaaaatgcgggagacgtgctatg
ccaactatgatggtaggatctgcagcaatatttatagattgtgatgagtgctggaagttg
tttttggttacaagaaaaggatccttttatgtgtgggatctattcaagcggaactgtctt
cttcatgattcgttggcatctctggttgcttcaaacccaaacccatctgcaaaagatgca
ggtgtgatcaaagttatatcagcaaagctatcaagatctggttctcctcttgttgttctt
gccactcgccatgccttcctctttgacatgggcctgatgtgctggcttagggttgcagat
gactgctttcctgggtcaaatttttcaagctcctggcattcgggttcaactcagagtggt
gagctggcagctttgcaggttgatgttcggaaatatgtggccaggaagccaggttggagc
agggtgactgatgatggagtgcagacacgtgctcatttggaagctcagttggcttcttca
ctggctttaaagtcccctaaagactatcgtcaatgccttctttcatacatacgcttcctt
gcgagagaagcagatgagtctcgcttacgagaagtctgtgagagtttccttggacctcca
actgggatggtggaggatacaccttcagatccaaagaacctggcatgggatccttatgtg
cttggaatgaggaaacataaactcttacgagaagatattcttccagcaatggcttcaaat
agaaaagtacagcgattgcttaatgaattcatggatctcatttccgaatatgaaagcgct
gaaacaaatctagagaaaaggtctcaaacttcaccaatagcatgtccaccagcagctgat
caaatggaagctgctccatccgggacaaatcaaaaggactctgtccctgctgcaacagat
caaaagaagtctgttcctgcttcaattgatgaaaaggactcctccgagttagcagcagat
aaagaaaattctgctcaagcggcagaagatacagttaattcagatccacaaatgatcaat
caagttagtcttgctccacaagatgcaggttcttga
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