Prunus avium (sweet cherry): 110746385
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Entry
110746385 CDS
T05161
Name
(RefSeq) LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase RING1-like
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
pavi
Prunus avium (sweet cherry)
Brite
KEGG Orthology (KO) [BR:
pavi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pavi04131
]
110746385
04121 Ubiquitin system [BR:
pavi04121
]
110746385
Enzymes [BR:
pavi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
110746385
Membrane trafficking [BR:
pavi04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
110746385
Ubiquitin system [BR:
pavi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
110746385
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Zn_ribbon_19
zf-RING_2
zf-C3HC4_2
zf-RING_11
zf-C3HC4
zf-rbx1
zf-RING_UBOX
zf-C3HC4_3
zf-RING_5
zf-ANAPC11
FAR1_N
zf-HC5HC2H
zf-RING_16
zf-C2H2_DHX34
Zf_IFT144_1st
VPS18_RING_C
PHD_NSD
Prok-RING_1
Motif
Other DBs
NCBI-GeneID:
110746385
NCBI-ProteinID:
XP_021802294
UniProt:
A0A6P5RH46
LinkDB
All DBs
Position
Unknown
AA seq
378 aa
AA seq
DB search
MSSSGGNSGGVGGPIAPPQLYFCHQCDRTVSLTPPPTSDLVCPICSGGFVEEMETPNPNT
FPPNPFFSVPSSDAPPFASSGFPLLFSAPGPGNFSDDLSALFGGAPARSSPFQDPDAFNP
FVFLQNYLQTLRANGANVQFVIDNNPGAXGDPTGFRVPPNLNLGDYFFGPGLEQLIQQLA
ENDPNRYGTPPASKSAVEGLPVVKISKELLDSDSSQCAVCKDSFELGEEAKQMPCKHIYH
SDCILPWLELHNSCPVCRYELPTDDTDYEQRLSGASANANRANQSAAAGGVNIFAGGGGG
GSGSGIGIGIGAPSLDNQSPTPRTVERRFTISLPRLFRVFGGSAETSNSGSGNNDESNSG
TRGGHNSGSEEPRHEDLD
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcctcgggcggcaactccggcggtgttggtggcccgatcgctcctcctcagctt
tacttttgccaccagtgcgatcgtacggtttccctcacccctccacctacgtccgatctc
gtttgccctatttgcagcggtggcttcgtcgaagagatggaaacccctaaccctaacact
tttccccccaatcccttcttctccgtcccctcctccgacgctcctcccttcgcctccagc
ggctttcccctcctcttctccgctcccggccctggaaatttctccgacgatctctctgcc
ctcttcggcggcgcacccgcacgctcctcgccgtttcaggaccccgacgccttcaacccc
tttgtgttccttcaaaactatttgcaaaccctaagagcaaatggtgccaatgtccagttc
gtgatcgataacaaccccggcgccnggggggacccgacaggttttcgcgtcccccccaat
cttaatctcggcgactacttcttcggcccgggcctcgagcaattgatccagcagctcgcg
gagaacgacccaaaccggtacggcacgccacccgcttcgaaatccgcagtggagggcttg
ccggttgtgaaaatctcaaaggagttgttggattccgattcgtcccagtgcgctgtgtgt
aaggactcgttcgagctcggcgaggaggccaagcagatgccctgtaagcacatataccat
tcggattgcattctgccttggctggaattgcacaactcatgtcctgtttgtcgctacgag
ttgcccaccgatgatactgattacgagcagaggcttagcggggcctcagccaatgccaat
cgagctaatcaatctgcggcggctggtggggtcaatatttttgccggaggtggtggtggt
gggagtgggagtgggattgggattgggattggtgcgccatctctagacaatcagagtcca
actccccgaacggtggagcggagatttaccatctccttgccacgccttttcagggtattt
ggtggttctgctgagactagtaatagtgggagtggaaacaatgatgagtcgaactcgggg
actaggggaggtcataactctggatcggaggagcctaggcatgaagatcttgattaa
DBGET
integrated database retrieval system
