Prunus avium (sweet cherry): 110746632
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Entry
110746632 CDS
T05161
Name
(RefSeq) tRNA pseudouridine synthase A, mitochondrial-like
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
pavi
Prunus avium (sweet cherry)
Brite
KEGG Orthology (KO) [BR:
pavi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pavi03016
]
110746632
Enzymes [BR:
pavi01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
110746632
Transfer RNA biogenesis [BR:
pavi03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
110746632
Prokaryotic type
110746632
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF7261
New_glue
Motif
Other DBs
NCBI-GeneID:
110746632
NCBI-ProteinID:
XP_021802551
UniProt:
A0A6P5RNJ3
LinkDB
All DBs
Position
Unknown
AA seq
534 aa
AA seq
DB search
MENPDTKTTRSPPPQEPNLKKLKMSTTTTSDDDETTTTDSTKKQRYKRRKVAIFFAYCGV
GYQGMQKNPGAKTIEGDLEEALYLSNAVPEQDRNNPKRYDWARSARTDKGVSAVGQVVSG
RFYVDPPGFVDRLNSNLSPQIRIFGYKRVTASFNAKKFCDRRRYVYLIPVFALDPSAHRD
RGSVLASLGSDKEFVKCLECSERGRKVGGLMGKRNYELRGTSFELDISSNTNESVVDSEF
NEETKVFPDNAGGDDSKSEPRNEISTSSNNNVVSGVEVENSEETDLNSEPLNDTTKVSVG
EENANGEEKPEKESGSEFCYGEKEKDRFNRILNCYEGTHNFHNFTTRTKAADPAAQRYII
SFNANTAVTVGGLDFVKCEVVGQSFMLHQIRKMIGLAVAIFRNCAPESLLEIALQKDVNI
NVPTAPEVGLYLDECFFASYNQKWGDSHEELSMKDYEQEAEDFKMKHIYPHIASTELKEG
VVGLWLHSLNHRNYPDLCAAAAAADSNGNTSNGESVDVGNVAGEKSCSPVSFIV
NT seq
1605 nt
NT seq
+upstream
nt +downstream
nt
atggagaacccagatacaaaaaccactagatcaccgccgccacaagaaccaaacctcaag
aagctcaaaatgtcgaccaccaccaccagcgatgacgatgaaaccaccaccacagacagc
accaaaaagcaaaggtacaagcgtcgaaaggttgcaattttcttcgcttattgcggtgtg
ggataccaaggcatgcaaaagaatccaggcgccaaaaccatcgagggcgacctcgaagaa
gccctctacctctccaacgcggttcccgagcaggaccgcaacaaccctaaacgctatgat
tgggcccgctccgcccgtaccgataagggcgtaagcgccgtcggtcaggttgtatcgggc
cgcttctatgtcgacccaccgggcttcgtcgaccgcctcaattccaacctttcccctcag
attcggattttcggctacaagcgcgtgacggcgtcgtttaacgccaagaagttctgtgat
cggagaaggtatgtgtatctcattcccgtgtttgctcttgatcccagtgctcatcgcgat
agagggagcgttttggctagtcttgggtctgataaggagtttgttaagtgcttggagtgc
tccgagagagggcgtaaagtggggggcttgatgggtaagcgcaattatgaattgagaggg
acgagttttgagctagacatttcgtcgaacaccaatgagtctgtggttgactctgagttt
aatgaagaaactaaggtttttccggacaatgctggtggtgatgattccaaatctgaaccc
agaaatgaaattagcactagtagtaataacaatgtggtttctggagttgaggttgagaat
tccgaggaaactgatttgaattcggagccactgaatgatacaacaaaagttagtgttggt
gaagagaacgctaatggagaagaaaagccagagaaggaaagtggaagtgagttttgttat
ggtgagaaggagaaggataggttcaacagaatcttgaattgttatgaggggactcataac
ttccacaacttcaccaccagaactaaagctgcagaccccgctgctcagcgatacatcatt
tcgttcaatgcaaacaccgcagttacagttgggggtttggactttgttaagtgtgaagtt
gtagggcagagcttcatgcttcatcaaattaggaagatgattgggcttgccgtggcaatc
ttcaggaactgtgctccggagtcattgttagaaatagctttgcaaaaggatgttaacatc
aatgtgcctacggcacctgaggttggtttgtacttggacgagtgcttctttgcttcatat
aaccagaaatggggagacagtcatgaagagctgtcaatgaaagactatgaacaagaggca
gaagatttcaagatgaagcatatataccctcatattgcatccacggagctaaaagaaggt
gtcgtgggtctctggttgcactctctcaaccaccgtaattaccccgatttatgcgctgct
gctgctgctgctgacagcaatggaaacaccagcaatggagaaagtgttgatgtggggaat
gtcgctggggaaaaaagttgtagtccagtttcattcatcgtatga
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