Prunus avium (sweet cherry): 110747115
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Entry
110747115 CDS
T05161
Name
(RefSeq) cyclic nucleotide-gated ion channel 1-like
KO
K05391
cyclic nucleotide gated channel, plant
Organism
pavi
Prunus avium (sweet cherry)
Pathway
pavi04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
pavi00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
110747115
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pavi04040
]
110747115
Ion channels [BR:
pavi04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
110747115
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Motif
Pfam:
Ion_trans
cNMP_binding
DUF2254
Motif
Other DBs
NCBI-GeneID:
110747115
NCBI-ProteinID:
XP_021803011
UniProt:
A0A6P5RPN8
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Position
Unknown
AA seq
458 aa
AA seq
DB search
FAGYLSWLSFLTDLLSVLPMPQILVVVLFFKMKGPEYLEHRKVLNIFLLIQYLPRIFRII
LSSKKLIKTTGIRVKAIFNFFLYILASHVLGAFWYFFSVQRETSCWHRACERNSTTDLDY
TGCMSTFYCDDRSTTLRNITFFNEHCGVEFPGDTKPPFNYGIFLDSLKNDGNTGDINFPT
KLCFSFWWGLRNLSNFGTNLTRSNYVWENFFAILISITGVLLFVYLIGNVQTFIQLTTTK
SEDIRQKIKIKEQVLETWMEKNHVPEDLKKEIMKNIHQKLEKDKDADLENLFDVLPWYTK
KILKRHLCWDILSQVQFLKVMDEKVLKMICDYATPVTFPEDKIIFQMRHPVDRMLFIIEG
TVLTYSTTSDPGRTHGGKTTTNNGASPSIATKQLGRGQIYGEELLTWASPNKSRVDKLPT
STEIVKCHTKVEGFALSAKDLISVASKCRRWWNLNNDP
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
tttgctgggtatttgtcatggctctctttcttaactgaccttctctctgttcttcccatg
ccacaaattttagtagtagtgcttttcttcaaaatgaaagggccggaatatttggaacac
aggaaggttttgaacatttttcttctcattcagtatttgccgaggatttttcgaattatc
ttatcatccaagaaacttataaagacaactggaatacgagtcaaagccatattcaatttt
tttttgtacattcttgccagccatgtacttggagccttttggtatttcttttccgttcaa
cgagagacatcatgttggcaccgagcttgtgaaagaaatagtactacagatctagattat
acaggatgcatgagtaccttttattgtgatgatcgcagtactactttaagaaatattaca
tttttcaatgaacattgtggtgtagaatttccaggggacactaagccgccatttaattat
ggaatatttcttgattcccttaagaatgatggtaacacgggggatataaattttccaacc
aagttatgcttctctttttggtggggcttgagaaatctaagcaactttggcacgaatctc
acaagaagtaattatgtgtgggaaaatttctttgcaatccttatttctatcactggtgtg
ctactatttgtatatctcattggaaatgtgcagacattcattcagttgacaaccacaaaa
tcggaggacataaggcaaaagattaaaataaaagagcaagtgttagaaacatggatggag
aaaaatcatgttcctgaagatttgaagaaagaaatcatgaaaaacatacatcaaaaattg
gaaaaagacaaagatgccgatctggagaatctattcgatgttcttccctggtataccaaa
aaaattctgaagcgtcatctttgctgggatattctatcacaagtacaattccttaaggtt
atggatgaaaaagtgctgaaaatgatttgcgactatgcgacgccagtgacattccccgaa
gataaaatcatatttcaaatgcggcacccagttgatcgcatgctcttcattatagaaggc
actgtcttgacctacagcacaacttctgatcctggtcgtacacatggtggaaaaacgacg
acaaataacggtgcctccccatcaattgccaccaagcaacttgggagagggcagatttat
ggagaagagcttctgacgtgggcatcgcccaacaaatctagggttgacaagcttcctacc
tccaccgaaattgtgaaatgtcatacaaaagtagaaggctttgctctctcagccaaggac
ttgataagtgtagcctccaaatgccgacgctggtggaacttaaacaatgacccttga
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