Prunus avium (sweet cherry): 110747243
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Entry
110747243 CDS
T05161
Name
(RefSeq) probable small nuclear ribonucleoprotein E
KO
K11097
small nuclear ribonucleoprotein E
Organism
pavi
Prunus avium (sweet cherry)
Pathway
pavi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pavi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110747243
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pavi03019
]
110747243
03041 Spliceosome [BR:
pavi03041
]
110747243
03032 DNA replication proteins [BR:
pavi03032
]
110747243
Messenger RNA biogenesis [BR:
pavi03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
110747243
Spliceosome [BR:
pavi03041
]
Complex A
U1 snRNP components
Sm proteins
110747243
U2 snRNP components
110747243
Complex B
U1 snRNP components
110747243
U4/U6.U5 tri-snRNP components
110747243
Complex C
U2 snRNP components
110747243
DNA replication proteins [BR:
pavi03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
110747243
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Hfq
Motif
Other DBs
NCBI-GeneID:
110747243
NCBI-ProteinID:
XP_021803142
UniProt:
A0A6P5RKB9
LinkDB
All DBs
Position
Unknown
AA seq
88 aa
AA seq
DB search
MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDEAEEV
SIKKNTRKSLGRILLKGDNITLMMNTGK
NT seq
267 nt
NT seq
+upstream
nt +downstream
nt
atggcgagcaccaaagttcagaggattatgacccaacccattaacttgattttcaggttc
cttcaaagtaaagcccgcattcagatttggctctttgagcaaaaggacctgaggattgaa
ggccgaatcattggttttgatgagtacatgaatttagttctggatgaggccgaagaagtc
agcatcaagaaaaacaccagaaagtcattgggaaggattcttcttaaaggagacaacata
actctgatgatgaacacgggaaaatga
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