Prunus avium (sweet cherry): 110748863
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Entry
110748863 CDS
T05161
Name
(RefSeq) RNA polymerase I-specific transcription initiation factor RRN3-like isoform X1
KO
K15216
RNA polymerase I-specific transcription initiation factor RRN3
Organism
pavi
Prunus avium (sweet cherry)
Brite
KEGG Orthology (KO) [BR:
pavi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pavi03021
]
110748863
Transcription machinery [BR:
pavi03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
Transcription initiation factors
110748863
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRN3
Motif
Other DBs
NCBI-GeneID:
110748863
NCBI-ProteinID:
XP_021804525
UniProt:
A0A6P5RI56
LinkDB
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Position
Unknown
AA seq
627 aa
AA seq
DB search
MGVVLRDDEAAFRKMGDHDLIDSYLVYRARDTLCSVSSLEKFEPLAQADTEDYRQLLSAM
NPEELGANEVAMLVTNLKALAGAVAYIDNVLHDELLSAISNMSLWNYKPDVMDALLEFIE
SLATSSGKYVDYCLKMLTCQFFPPLSLPLPKILARKDGVLSRVHSSLKYIADLVPLSPVR
LVPIVLNGKPQYCFNTISTLSLVIYVENMFKLESGVLGEVVRIPMFAGVVDLLLELDVNI
GWEDIENETSERIFEMELEDGDESRDDDSELPRKLSQKILGGNSFAEKLDSLMVLTFEHL
ESCQVADRLIKIFDTLLELFKKTILTTYKPKFAQFVIFYACSLDPKNCGVTFALMLEHTF
FFSTDGPVLRMKAVAYLASYLSRAKFLSVFVIAGTLERLVDWCVKYVKMQDNVINPKAHR
LFYSGCQAIMYVLCFRMRSMMDDPQLKPWLVRLPLESILNNKLSPLKVCLSSIVLEFLRQ
AKAARLFMTSEKFIFDDYLESELSREFGGTERLDMFFPFDPCLLEKSDSYIRPNFIFWSM
VQPTYDDEDSSDEDVGEAFASDDDGGMDYGIMQSLEEQHFDFAEVGSALNKMSITPKDSL
HSRFGGAINQPMRMPSRIRPSTSPESL
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
atgggcgttgtgcttagggacgacgaggcagctttccgtaagatgggagaccatgatttg
atcgattcttacctggtttatcgcgccagagatactctctgctctgtctcgtcgcttgaa
aagtttgaacctttggctcaggctgataccgaagattaccggcagctccttagcgctatg
aaccccgaagagcttggcgctaatgaagtagctatgcttgtgacaaatttgaaagcacta
gctggagcagttgcttacatagacaacgttctacatgatgaacttctctctgcaatttct
aacatgagcttgtggaactataagcctgatgtgatggatgcattgcttgaattcattgaa
tccttggccacttcaagcgggaagtatgttgattattgtttgaagatgctcacatgccag
ttctttccacctcttagtttgccacttccaaaaattcttgcaagaaaggacggagtttta
tctcgtgtgcattcatctctgaaatatatagctgatttggtgccactttcccctgtgaga
ctagtgccaattgttttaaatggaaagccacaatattgttttaatactattagtaccctt
agtcttgtgatatacgtagagaacatgttcaagttggagagtggcgtgcttggagaagtg
gttcggatcccaatgtttgcgggtgttgtggatttgctgctagaactcgatgtgaatatt
ggatgggaagacatagaaaatgaaactagtgaacgaatatttgaaatggagctagaagat
ggggacgagtctagagatgatgatagtgagcttccaagaaaattaagtcagaagatttta
ggaggaaattcatttgctgaaaaattagatagcttgatggtgttaacttttgagcatctt
gaatcttgtcaagtggctgaccgtttgatcaagatctttgatactcttctcgagttattt
aagaagactattttgactacatacaaaccaaaatttgcccagtttgtgatattctatgca
tgttctcttgatccaaaaaactgcggtgtgacatttgctttgatgcttgaacatactttc
tttttcagtaccgacggccctgttctcagaatgaaagccgttgcttatcttgctagttat
ttgtctcgtgccaagtttctgtcagtctttgttattgctggcacactggaaaggttggtg
gattggtgtgtgaaatacgtcaaaatgcaggataatgtaataaatccaaaagctcataga
ttattttattctggatgtcaggccatcatgtatgtgctgtgcttccgaatgagatcaatg
atggatgatcctcagctgaagccatggcttgttcgtttgcctttagagtcaattttgaat
aataagttgagcccgttgaaggtgtgtctgtcttccattgtgttggagtttctacgacaa
gcaaaagcagctaggttattcatgacatctgagaaattcatttttgacgactacctggaa
tcagaactttcgagggaatttggtgggacagaaagactcgacatgttcttcccatttgac
ccatgtctgctggaaaaaagtgacagttacatccggccaaacttcattttctggtcaatg
gttcaacctacatatgatgacgaagattccagtgatgaagatgtcggcgaagcttttgcc
agtgacgatgacggtggaatggattatgggattatgcagagcttggaggaacaacatttt
gattttgctgaagttggctctgcattgaacaaaatgtcaatcacaccaaaggattcctta
catagtaggtttggtggtgcaataaaccaacccatgcgaatgccttcgagaattagaccg
tcaactagtccggagtctttgtaa
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