Prunus avium (sweet cherry): 110749001
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Entry
110749001 CDS
T05161
Name
(RefSeq) putative GPI-anchored protein pfl2
KO
K14306
nuclear pore complex protein Nup62
Organism
pavi
Prunus avium (sweet cherry)
Pathway
pavi03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pavi00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
110749001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pavi03019
]
110749001
Messenger RNA biogenesis [BR:
pavi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
110749001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nucleoporin_FG
DUF4763
APG6_N
DUF724
OVT1
Motif
Other DBs
NCBI-GeneID:
110749001
NCBI-ProteinID:
XP_021804690
UniProt:
A0A6P5RIK5
LinkDB
All DBs
Position
Unknown
AA seq
687 aa
AA seq
DB search
MSGFPFGSSSSASSQFTPFIKPPVFYPATSTGFSWSSAPAFGSSSPSSAVAHSFGFRSSA
ATSAPSSWFGSSPSTVSASSSPLIGSASASASSLFSSTFSAPSPLFGSSSTVSSTPLFSS
TSSSSASTTPSSLFRSSSTVSSTPLFSSASSSSASTTPSSLFGSSSTVSSTPLFSSSSSS
SASTTPSFPSFSFPTASPLSKPTTTSTPITPTPSATASSFSCAPSTSSGSQPSFVFSDTA
SSPAPISFAKPTSLSFSTRFAPLFSTVSTTSASSTPTATTTTQVFLSLPAFGTPPTTSAV
SSTVAKASMAAPANSAAPSGTSGLTGFGVSSAAASSTGFSLLTKGSTPASSSQAQPSTTV
PVFGVTTAAPVVATTTTQTSTSPVEASTSGTTSTVSTTISTAPKLPSEITGKTVEEAPPT
SFKHETSYPITTSGPSATSDCSKLVEQSTLAAEVQISTAISPVLQPSSLDFDALDLEAQL
ALICGGSSSSGFTPSDKAQQAISRINLWQAKDFAVEEGHQSVGELINNLQILAEENLIPK
SIFSSGVTSAQEFQHAADLWGTIHTSFEQAITCRDVCQRSTENLEKSRSQCSAQDLELQN
LKVEAQGVEAEIAKLQTQLKAIKTKEKEVRIKLQLNLRDAWELQKQITTAQPGLEESHAL
ILRGSKLRADMDAKFGVLKVILTSIVL
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggcttcccattcggatcctcctcctccgcttcttctcagtttacgcctttcatc
aaacctcctgtcttttaccccgccacatcaaccgggttctcatggtcgtccgccccagct
ttcgggtcctctagccctagctccgccgtggcccattctttcggattcaggtcctcagca
gcgacctccgctccatcatcctggtttggctcctctccttcaactgtatcggcatcaagt
tcacccctgattggctccgcttccgcttctgcttcatctctgtttagctcaactttcagc
gcaccctctcccctgtttggctcatcttccacagtttcttcaacacccttgttcagctct
acttcgtcgtcttcagcttcaaccacaccctcttccctgtttcgctcatcttccacagtt
tcttcaacacccttgttcagctctgcttcgtcgtcttcagcttcaaccacaccctcttcc
ctgtttggctcatcttccacagtttcttcaacacccttgttcagctcttcttcgtcgtct
tcagcttcaaccacaccctcattcccaagcttctcgttcccaacagcctcgcctctttca
aagccaacaacaacgtcaacacccatcactcctactccatcagcaacggcttcaagcttc
tcgtgcgcaccatccacttcctctggttcacaaccctctttcgtattctccgataccgcc
tcatcacccgcccccatttccttcgcaaaacccacctcactgtccttctcaactcgtttt
gctccattgttttctacagtctccaccacaagcgcttcttcgactccaactgctaccacc
acaacccaagtctttttgtctttgccggcttttggtacgcctcctactacttctgcagtt
tccagtactgttgcaaaggcttcaatggcagcgcctgccaactcagctgctccgtccggc
acatcgggtttaacagggtttggagtgtcctccgcagctgcttcttctactggcttttcc
ttgctgacaaaagggtcgacgcctgcttcctcatcacaagcgcaaccaagcaccactgtg
cctgtctttggtgttactactgcagcacctgtagttgcaacgacaacaactcagacatca
acgtcacctgttgaggcttcaactagtgggacaacttcaaccgtcagcactacaatatct
actgcaccaaaattaccttctgagatcacagggaagactgtggaggaggctccccctact
tctttcaagcatgaaacttcatatcctattaccacatctggtccttcagctacatcggat
tgttccaaacttgtggagcaatctacacttgccgctgaggtccagatttctactgccatc
tctccagtactacaaccctcaagtctggattttgatgctctagatctggaggctcaattg
gcattaatatgtggaggctcttctagttctggctttactcccagcgacaaggctcaacaa
gccatttctaggatcaacctctggcaagctaaggatttcgctgtggaagagggccatcaa
tctgtgggggaactcattaataatttacaaattttggctgaagagaatctcatccccaag
tctattttcagttctggagtcacttcagctcaagagtttcaacatgctgcagacttgtgg
ggaacaattcacacttccttcgagcaagctatcacctgtagagatgtctgtcaaagatct
actgaaaatttagagaaaagtagatcccaatgctctgctcaggacttagaattgcagaat
ctcaaagttgaagctcaaggggtagaagccgagattgccaaattgcagacacaactcaag
gccatcaagactaaggaaaaggaagtacgaattaagttgcaacttaaccttagagatgcc
tgggagttgcaaaaacaaatcaccactgcccaacctggattggaggagtctcacgcatta
attctgagaggatcaaaattgagagcagacatggatgccaagtttggagttttgaaagtt
attttaaccagtattgtactataa
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