Prunus avium (sweet cherry): 110749075 Help Entry 110749075         CDS       T05161                                  Name (RefSeq) splicing factor 3B subunit 3   KO K12830   splicing factor 3B subunit 3 Organism pavi  Prunus avium (sweet cherry) Pathway pavi03040   Spliceosome Brite KEGG Orthology (KO) [BR:pavi00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     110749075  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:pavi03021]     110749075    03041 Spliceosome [BR:pavi03041]     110749075    03036 Chromosome and associated proteins [BR:pavi03036]     110749075 Transcription machinery [BR:pavi03021]  Eukaryotic type   RNA polymerase II system    Coactivators     SAGA/TFTC/STAGA complex      110749075 Spliceosome [BR:pavi03041]  Complex A   U2 snRNP components    U2 snRNP specific factors     110749075  Complex B     110749075  Complex C    U2 SnRNP specific factors     110749075 Chromosome and associated proteins [BR:pavi03036]  Eukaryotic type   Histone modification proteins    HAT complexes     STAGA complex      110749075     TFTC complex      110749075 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Beta-prop_RSE1_2nd Beta-prop_RSE1_1st CPSF_A Motif Other DBs NCBI-GeneID:  110749075 NCBI-ProteinID:  XP_021804786 UniProt:  A0A6P5RUK8 LinkDB All DBs Position Unknown AA seq 1378 aa AA seqDB search MAVSEEECSSAKSRSSSSASSSSSHYLAKCVLRGSVVLQVLYGHIRFPTSYDVVFGKETS IELVIIGEDGIVQSICEQPVFGTIKDIAILPSNDKFRTQNPQMLGKDLLVVISDSGNLSF LSFCNEMHRFFPVTHVQLSNPGNSRNQLGRMLAIDSSGCFIAASAYENQLAMFSVSVSGG SDIIDKKIVFPPEKEADASAARVQKNSICGTIWSMSFISKDPSQSSKGHNPVLAVLLNRR EAVLNELLLLGWNISEQEIYVISTYTEDGPLAHSIVEVPNSYGFAFMFREGDALLMDLRD AQIPYCVYRTSPNFLSNVVDEANFVQESSRGCDLSRVLQVDDEGGLFNVAACALLELSDL DPMCIDGDKYSVNVTYKHVCSWSWEPGNAKNPRMIICADTGEYFMIEIIFGPDGLKVQES ECLYKGLPCKAVLWVEGGFLAAIVEMGDGMVLKMENGALHYASPIQNIAPVLDMSVVDYH DEKHDQMFACCGVAPEGSLRIIRSGISVEKLLRTAPIYQGITGTWTLRMKVIDSYHSFLV LSFVEETRVLSVGLSFTDVTDSVGFQPDVSTLACGIVNDGLLVQIHKSAVRLCLPTKAAH SEGTPLPYPVCTSWFPENMSISLGAVGHNLIVVSSSNPCFLFILGVRLLSGHHYEIYEMQ HLRLQNELSCVSIPLKRFEGTSLVDNSCAATLPFGVDISNIFVIGTHKPSVEVLSLVPNE GLRVLASGTISLTNNLGTAISGCIPQDVRLVLVDRLYVLSGLRNGMLLRFEWPASPTMPG CSLSVNTNTVFPSISAANSFGRKIYDVKFSEKTKDKFPIELQLIATRRIGITPVFLVPLS DSLDGDIVVLSDRPWLLHTARHSLSYTSISFQSSTHVTPVCYVECPKGILFVAENCLHLV EMVHSKRLNVQKFHLGGTPREVLYHSESRLLLVMRTDLSNDTSSSDICCVDPLSGSVLSS FKLEPGETGKSMELVRVGNEQVLVVGTSLSSGPVIMPSGEAESTKGRLIVLCLEHVQNSD SGSMTLCSKAGSSSQRASPFHEIVGYATEQLSSSSLCSSPDDTSCDGIKLEETEAWQFRL AYVTKWPGMVLAICPYLDRYFLASSGNAFYVCGFPNDNSQRVRKFAWARTRFMITSLTAH FTTIAVGDCRDGVLFYAYHEDSKKLQQLYFDPCQRLVADCILMDVNTAVVSDRKGSIAVL SCADYLEDTASPECNLTVSCAYYMGEIAMSIRKGSFSYKLPADDVLKGSDGNIDFSQNAI IVSTLLGSIITFVPISREEYELLEAVQDRLVVHPLTAPILGNDHNEYRSRENPVGVPKIL DGDMLSQFLELTGMQQEAVLSSPLGAQGTVKPSLKSRYALIPVNQVVQLLERVHYALN NT seq 4137 nt NT seq  +upstreamnt  +downstreamnt atggctgtctcagaggaagagtgttcgtctgcaaagtcgcgatcatcgtcatcagcctcc tccagcagctctcactacctcgccaagtgcgtcctccgagggagcgttgttcttcaggtc ctctatggtcacatccgctttcccacttcctacgacgtcgtcttcgggaaggagacttcc atagagttggtcataattggtgaagatgggattgtacagtctatatgtgagcagcctgtg tttggcaccattaaggacattgccatcctaccctcgaatgacaaattccgcacccaaaac ccacagatgctgggtaaagaccttttggttgttatttctgattctgggaacctctcgttt ctctctttttgcaatgaaatgcacaggttttttcctgtgacacacgttcaactttctaat cctggaaattcaaggaatcagcttggaagaatgctagccattgattcaagtggctgtttc attgctgctagtgcgtatgaaaaccagttggctatgttctctgtttcagtgtctggtggc agtgacattattgataagaaaatagtcttccccccagaaaaagaagcagatgctagtgct gccagagttcaaaaaaacagtatatgtggtacgatatggagcatgagctttatttcaaag gatcctagtcaatcaagtaaggggcataatcctgtacttgccgttcttctaaataggagg gaggcagtccttaatgaattgctgttactggggtggaatattagtgaacaggaaatttat gtgatttctacatatactgaagatgggccgttagcacatagtattgttgaagttcctaat tcttatggatttgcttttatgtttagggagggtgatgctctcctaatggatcttagagat gcacagatcccctattgtgtctacagaacaagcccaaatttcttatccaatgtggttgat gaggcaaattttgttcaagagtcatctagaggatgtgatctatctagagtacttcaggtt gatgatgaaggaggtttatttaatgtagctgcatgtgctttactagaactaagcgattta gatccaatgtgtatagatggtgacaaatacagtgtgaatgtgacttacaaacatgtgtgt tcatggagttgggaaccgggaaatgctaaaaatcccagaatgatcatttgtgcagataca ggagaatatttcatgattgaaattatctttggtcctgatggccttaaggttcaagaatct gagtgtctttacaaaggtttaccatgcaaggcagttttgtgggttgaaggcgggtttctg gctgcaatagtagagatgggagacgggatggtattgaaaatggaaaatggggcacttcat tatgcaagtcctattcaaaatattgccccagtattggatatgtcagttgtggattaccat gatgaaaaacatgatcaaatgtttgcctgttgtggagtggcaccggaggggtcactaagg attattagaagtggtataagtgtggaaaagctactgaggactgcacctatatatcaaggg attactggtacttggacattacgaatgaaagtaattgattcttaccattcttttcttgtg ctatcatttgttgaggagaccagagtattatcagttggtttaagctttactgatgtgacg gattcagttggttttcagcctgacgtttctactttggcctgcggtattgtaaatgatgga ttgctggttcagattcacaaaagtgcagttaggctctgtttacccaccaaggctgcccat tctgaaggtactccactgccttatccggtttgcacatcttggttcccagaaaatatgagt atcagtttgggggctgttggacataatctaattgttgtttcttcgtctaatccatgcttt ttattcattcttggggttagattgctttcggggcatcattatgaaatatatgaaatgcaa catttgagattgcaaaatgaattatcgtgtgtttccattcctctgaaacgttttgaggga accagtctggtggataatagctgtgctgccacccttccatttggagttgacatcagtaat atctttgttattggcacgcacaagccttcagtggaagttttgtctcttgtgcctaatgaa ggactgagagttcttgcttctgggacgatctcgttaacaaataatttgggaactgctatt agtggctgcattcctcaagatgtaaggcttgtattagtggaccgattgtatgtcctttcg ggattgaggaatggaatgctgcttcgtttcgaatggcctgcttccccaacaatgcctggt tgttctctttcagttaatacgaatactgtttttccaagtatatcagcagcaaattcgttt ggccggaaaatatatgatgttaagttctctgagaagacaaaggacaaatttcctattgaa cttcaattgattgctacacgtcggattggcatcacccctgttttcttggttcctttgagt gactcgctagatggtgatattgttgttctcagtgataggccttggttgttgcatactgca aggcacagcctctcatatacttctatctcatttcaatcttcgacacatgtcactcctgta tgttatgtagaatgccctaagggaattttatttgttgcagagaactgtctacatttggta gagatggtgcatagtaagaggcttaatgtgcagaagtttcatcttggaggcactccgagg gaggtcctttatcatagtgaaagcaggctattgcttgtgatgaggactgatttgagtaat gatacatcttcatccgatatatgctgtgtagatcctcttagtgggtcagtgctgtcatct ttcaaacttgaacccggtgaaacagggaaatccatggagttagtgagggttggaaatgaa caggttcttgtggttgggacgagtttatcttctggtccagtcataatgcctagtggtgag gctgagagtaccaagggacgtcttattgttctctgtcttgaacatgtgcaaaattcagac agtggctcaatgacattatgctcaaaggcagggtcatcttctcaacgagcatctccattt catgaaattgttgggtatgccacagaacagctttcaagcagtagtctttgcagtagccca gatgatacgagctgtgatggaattaaacttgaagaaactgaagcatggcagtttcgattg gcttatgtaaccaaatggcctgggatggtgcttgcaatctgtccttatcttgatcgttac ttcttggcgtcttctggtaatgctttttatgtatgcgggtttccgaatgacaattcccaa agagtgagaaagtttgcttgggcaaggacacgttttatgattacgtctttgactgcacat ttcactacaattgctgttggtgattgtcgtgatggtgtccttttctatgcttatcatgag gattccaaaaagctgcagcaactgtactttgatccatgtcagagattagttgctgattgc attcttatggatgtcaatactgctgttgtttcagatcgtaagggaagcattgctgttctt tcttgtgctgattatttagaagataccgcgagtccagaatgtaatttaacagtgagctgt gcttattatatgggcgagatagctatgagcatcaggaagggatcattttcatataaactt ccagctgatgatgtattgaagggtagtgatggaaatatagacttctctcaaaacgccatc attgtgagtacactgcttggaagcataataaccttcgtgccaatatcgagggaagaatat gaactcttagaagctgtccaagatagactagtggtgcatccattaactgctcctattctt gggaatgatcataatgagtatcgtagtcgtgaaaatccggtaggagtacctaagatactt gatggtgacatgctctctcaattcttggagctgactggtatgcaacaagaggcagtatta tcatcacctcttggggcacaaggcaccgtaaagcccagtttgaaatcgcgatatgcgcta atccctgttaatcaggttgtgcaactccttgagcgggttcactatgccctaaactaa

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