Prunus avium (sweet cherry): 110749129
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Entry
110749129 CDS
T05161
Name
(RefSeq) oligouridylate-binding protein 1-like
KO
K13201
nucleolysin TIA-1/TIAR
Organism
pavi
Prunus avium (sweet cherry)
Brite
KEGG Orthology (KO) [BR:
pavi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pavi03019
]
110749129
03041 Spliceosome [BR:
pavi03041
]
110749129
Messenger RNA biogenesis [BR:
pavi03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
110749129
Spliceosome [BR:
pavi03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
110749129
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_PARP14_3
RRM_7
RRM_5
RRM_DEAH11
Motif
Other DBs
NCBI-GeneID:
110749129
NCBI-ProteinID:
XP_021804840
UniProt:
A0A6P5RIZ8
LinkDB
All DBs
Position
Unknown
AA seq
413 aa
AA seq
DB search
MQQQRLKQQQAMMQQSLYQHPAILAAPQIEPILSGNLPPGFDSSTCRSVYVGNIHPQVTE
PLLQEVFSSTGPLEGCKLIRKDKSSYGFVDYFDRRSAAYAIVTLNGRHLFGQPIKVNWAY
ASSQREDTSGHFNIFVGDLSPEVTDATLFACFSVYSSCSDARVMWDQKTGRSRGFGFVSF
RSQQDAQSAINDLNGKWLGSRQIRCNWATKGATSNDDKQSSDSKSVVELTNGTSEDGQEK
PNEDAPENNPQYTTVYVGNLAPEVTSVDLHRHFHSLGAGTIEDVRVQRDKGFGFVRYSTH
SEAAVAIQLGNARFLCGKPIKCSWGSKPTPPGTSSTPLPPPAAAHMPGFSAADLAVYERQ
MALSKMGGAQALMLPQGQHALKAAMGMGAGASQAIYDGGFQNVATTQQLMYYQ
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atgcaacagcagaggctcaaacaacagcaagccatgatgcagcagtcgctgtaccaacac
cctgccatcttagccgctcctcagatagagcctatcttgagtggaaatctgcctcctggg
tttgattcaagtacatgccgcagtgtgtatgttggaaatattcacccacaggttactgaa
ccccttcttcaagaagttttctccagtactggtcctcttgaaggatgcaagctcataaga
aaagataagtcatcctatggatttgttgactactttgatcgtaggtcagctgcttacgct
attgtgactctcaatggcaggcatctgtttgggcagccgatcaaagttaattgggcatat
gcaagtagtcagagggaggatacatcaggtcactttaatattttcgttggtgatcttagc
cctgaggttaccgatgctacactgtttgcgtgtttttctgtttattcaagttgttcagat
gctagggttatgtgggatcagaaaactgggcgttcaaggggttttgggtttgtttctttc
agaagtcagcaggatgcccaaagtgcgataaatgacttaaatggaaaatggcttggaagt
agacaaattcggtgtaattgggccacaaaaggtgctacttccaatgatgacaagcagagt
tctgattctaaaagtgttgtagagctgacaaatggaacatcggaagatggtcaggagaag
cctaatgaagatgctccagagaacaatcctcagtatactacagtttatgtgggcaatctg
gctccagaggttacttcagttgaccttcatcgtcatttccattcccttggtgctggaact
attgaagatgtccgtgtgcaacgagataaaggttttgggtttgtgagatacagtacacat
tctgaagccgctgtagctatccagttggggaatgctaggtttctctgtggaaaaccaatt
aagtgttcatggggtagcaagcctactccaccaggaacaagctctaccccccttccaccg
ccggctgcagctcatatgccaggtttctcggccgctgatcttgctgtctatgaaagacaa
atggcactgagtaaaatgggtggtgcacaagccctcatgcttccgcagggtcagcatgct
ctgaaggcagctatgggaatgggtgctggagctagtcaggcgatatatgacggcggcttc
cagaatgtagcaacaacccagcaactcatgtactaccagtaa
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