Prunus avium (sweet cherry): 110749143
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Entry
110749143 CDS
T05161
Name
(RefSeq) protein CTR9 homolog isoform X1
KO
K15176
RNA polymerase-associated protein CTR9
Organism
pavi
Prunus avium (sweet cherry)
Brite
KEGG Orthology (KO) [BR:
pavi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pavi03021
]
110749143
Transcription machinery [BR:
pavi03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
110749143
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_16
TPR_12
TPR_8
TPR_19
TPR_14
TPR_17
TPR_6
TPR_CcmH_CycH
TPR_11
TPR_7
TPR_9
ANAPC3
TPR_10
ARM_TT21_N
ARM_TT21_C
Fis1_TPR_C
TPR_Slam
RPN7
ARM_TT21_5th
HAT_PRP39_C
NatA_aux_su
KATNA1_MIT
DUF7017
DUF6584
Motif
Other DBs
NCBI-GeneID:
110749143
NCBI-ProteinID:
XP_021804859
UniProt:
A0A6P5RPI0
LinkDB
All DBs
Position
Unknown
AA seq
1092 aa
AA seq
DB search
MACVYIPVQNSEEEVRVVLDQLPREATDIIDILKAEQASLDLWLIIAREYFKQGKLEQFR
QILEEGSGSEIDEYYADVRYERIAILNALGAYYTYLGKIETKQREKEEHFILATQFYNKA
SRIDIHEPSTWVGKGQLLLAKGEVDQAFSAFKIVLDGDRDNVPALLGQACVEFNRGHYSD
SLELYKRALQVHPDCPAAVRLGIGLCRYKMGQFEKARQAFQRVLQLDPENVEALVALAIM
DLHANTAAGIRRGMEKMQRAFEIYPYCAMALNYLANHFFYTGQHFLVEQLTETALAVTNH
GPTKSHSYYNLARSYHSKGDYDKAGVYYMASVKEISKPLEFVFPYYGLGQVQLKMGDLRS
ALSNFEKVLEVYPDNCDALKVLGHIYFQLGQTEKALEFMRKATKIDPCDSQAFLDLGELL
ISSDGGAALDCLKTARNLLKKEGEEVPIEVLNNLGVLHFERGEFELAQQTFREALGDGIW
LAFIDGKEKPPSIDANASISQYKDMNIFHQLEKEGHLVELPWNKVTTLFNLARLLEQLYN
IETASILYRLILFKYPDYVDAYLRLAALAKARNNFQLSIELVNDALKMNNKCPNALLMLG
DLELKNDDWVKAKETFRAASEATEGKDSYATLSLGNWNYFAAIRNEKRAPKLEATHLEKA
KELYTKVLAQHSANLYAANGAGVVFAEKGHFDVSKDIFTQVQEAASGNIFVQMPDVWINL
AHVYFAQGNFALAVKMYQNCLRKFFNNTDSQILLYLARTHYEAEQWQDCKKNLLRAIHLA
PSNYTLRFDAGVVMQKFSASTLQKPKKSVDEVRSTVAELENAVRLFRQLSAASSLHFHGF
DEKKIDTHVEYCSHLLEAARVHFKVAEHEEQKIRHKQEVARQMALAEEARRKAEEQRKFQ
LERRLQEDELKRVRQQEEQFERIKEQWKSSTPGSKRRERSEMDDEEGGNSEKRRRKGGKR
RKKDKYSRSRYDTLEAEADMMEDQEELEDEDANTTYREPTGQMNEQDDEENVQDPLAAAG
LEDSDAEDEVAAPSTTTVRRRRAWSESDDDEQQERQPGSSPVRENSAELRSDGEGREGGD
KGNGEAALDDDD
NT seq
3279 nt
NT seq
+upstream
nt +downstream
nt
atggcgtgcgtgtacataccggttcagaattcagaggaggaagtgagggtggttctggat
cagctcccaagggaagctactgatatcatcgacattctcaaggccgagcaagcctctctc
gatctctggctcattatcgcgagagagtatttcaaacaaggaaaacttgagcagttccgc
cagattttggaggaagggtctggctctgagattgatgagtattatgctgatgttcgatat
gagaggattgcgatcttgaatgctttaggggcctactacacctacctcggaaaaattgag
accaaacagagagaaaaggaggagcatttcattctagcaacacaattttacaacaaagca
tctagaatcgacattcatgagccttctacttgggttgggaaaggtcagcttttattggct
aaaggtgaagttgatcaagcattttctgcattcaagattgtattagatggagaccgggac
aacgttcctgcccttttgggtcaggcatgcgttgagttcaaccgtgggcattactcggat
tcattggagctgtacaagagggccctgcaagtacatcctgattgtcctgcggctgtaaga
cttggcataggtctctgtcgttacaaaatgggtcaatttgaaaaagctcggcaggccttt
caacgggttttacagctagatccagaaaatgttgaggctcttgttgcacttgcgattatg
gatttgcatgcaaatacagctgctggaataaggagaggaatggaaaaaatgcagagagct
tttgagatatacccttattgcgcaatggccttgaattatttggcaaaccattttttctac
actggtcagcactttctagttgagcaactaactgaaactgcacttgctgtcactaaccat
ggaccgacaaagtcacattcctactacaatttggcacgatcttaccatagcaagggggac
tatgataaggctggagtgtactacatggcatctgtcaaggaaatcagcaaaccccttgag
ttcgtatttccttattatggtttgggacaagtacaactgaagatgggagatcttagaagt
gcactatcaaactttgaaaaggttttggaggtgtaccctgataattgtgacgcattgaaa
gtccttgggcacatatattttcagcttggacagactgagaaggccttggaatttatgagg
aaggctacaaaaattgacccatgtgattcccaggcatttcttgacctaggagaactgttg
atttcatctgatggtggagcggctctggattgcctaaaaacggcacgtaatcttttgaaa
aaggaaggggaagaagtaccaattgaagttcttaacaatcttggggttcttcattttgag
aggggtgaatttgagcttgctcagcaaactttcagggaggcactaggtgatggaatatgg
cttgccttcattgatggtaaagaaaaacccccatctattgatgctaatgcatctatttca
caatacaaggacatgaatatatttcatcaacttgagaaagaaggtcacttagtcgagtta
ccctggaataaagtcacaacactatttaacctggccagattactcgagcagttgtataac
attgaaactgcaagtatattgtaccgtctcattttgtttaagtacccagactatgtagat
gcttatctgagactggctgcccttgcgaaagctcgaaataattttcaactaagcattgaa
ctggttaatgatgctctgaagatgaataacaagtgcccaaatgcactattaatgcttggt
gacttggaattgaaaaatgatgactgggttaaggcaaaagaaacctttcgggctgctagt
gaagcaaccgaggggaaggattcctatgccactctttctctgggcaactggaactacttt
gcggcaattcgcaatgagaaaagagctcctaagttggaagctacgcatttagaaaaagcc
aaagaactctacactaaagtcctagcccaacattctgctaatttgtatgctgccaatggt
gctggagtggtctttgcagagaagggtcactttgatgtttcaaaagacatttttacacag
gttcaagaagctgccagtgggaacatttttgttcagatgccagatgtgtggataaacttg
gcacatgtttattttgctcaaggcaattttgcattggctgtgaaaatgtaccaaaattgc
ttgagaaagttctttaataacacagactctcagattctactctatttggctcgtacccac
tatgaagctgagcagtggcaagactgcaaaaagaacttactgagagccattcatctggca
ccttcaaattacacgctgaggtttgacgcaggtgttgtaatgcaaaagttctcagcttca
accttacaaaagccaaagaaatctgttgatgaggtgcggtcaacagttgcagagctagaa
aatgctgttcgcttatttagacagttgtctgctgcttccagccttcactttcatgggttt
gatgagaaaaaaattgacacccatgttgagtattgtagtcacttgcttgaggctgcgaga
gttcacttcaaagtagctgagcatgaggagcagaagattcggcacaaacaagaagttgct
cgtcagatggcattggctgaggaagcccgtcgtaaggctgaagaacagaggaaatttcag
ttggagagaagattgcaagaggacgaactgaagcgagtgagacaacaggaggaacagttt
gagcgcatcaaggagcaatggaagagcagtacacctggttctaagcgaagggaaagatca
gaaatggatgatgaggagggcgggaatagtgaaaagagaaggagaaaaggtggaaaaagg
agaaagaaggacaaatactcaaggtcgcgttacgacacattggaagcagaagctgatatg
atggaagatcaggaagaactggaagatgaagatgccaacacaacttacagggagcctact
ggtcagatgaatgagcaggatgatgaagagaatgttcaagatcctcttgcagcagctggg
cttgaagattctgatgccgaggatgaggtggctgcaccttcaacaaccacagttcgacga
aggcgggcatggtcagaatctgatgatgatgagcaacaagagaggcagccgggatcgagt
cctgtaagagaaaattctgcagagttacggagtgatggagaaggcagagaaggcggtgat
aaagggaatggagaggccgctcttgatgatgatgattaa
DBGET
integrated database retrieval system
