Prunus avium (sweet cherry): 110749148
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Entry
110749148 CDS
T05161
Name
(RefSeq) RRP12-like protein
KO
K14794
ribosomal RNA-processing protein 12
Organism
pavi
Prunus avium (sweet cherry)
Brite
KEGG Orthology (KO) [BR:
pavi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pavi03009
]
110749148
Ribosome biogenesis [BR:
pavi03009
]
Eukaryotic type
90S particles
Other 90S particles
110749148
Pre-60S particles
Other pre-60S particles
110749148
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HEAT_RRP12_N
RRP12_HEAT
HEAT_ECM29
FANCI_S2
Motif
Other DBs
NCBI-GeneID:
110749148
NCBI-ProteinID:
XP_021804868
UniProt:
A0A6P5RSS8
LinkDB
All DBs
Position
Unknown
AA seq
1276 aa
AA seq
DB search
MEGIEMDDGCTLPLIEDDDICTSILARFGNSTREDHHHLCAAIGAMAQELKDKNLPSTPV
AYLGFTCSSLDGLSSQLEPPAHVIDALLTILSIVFQKVSAAILVKKSEFLSELLVRVLRS
PSLTVGAAVSGLKCISHLLIIRGRVNWSDVSSLYGFLLSFITDSRPKVRRQSQLCLRDVL
QSFQGTPLLALASEGVTNLFERFLLLAGGSNADAGEGPKGAQEVLYILDALKECLFLMSI
KYKTSVLKYYKTLLELHQPLVTKRITDSLNILCLNPSTDVSPEVLLDLLCSLALSVSTNE
TAVDGMTFTARLLGSGMAKVYSLNRHICVVKLPIVFNALRDVLASEHEEAVHAAAHTFKS
LIHACIDESLIKQGVDQIVMNANLDARKSGPTIIEKVCATIESLLGYHYAGVWDLAFQVV
SAMFDKLGVYASYFMRGALRSLAEMEKLSDEDFPFRKQLHECLGSALVAMGPETFLGLLP
LNLEAEDSTQVNVWLFPILKQHTIGARLSFFRESILGMVRTIKEKSRKLESQGRIFSSRS
TDALVHALWSLLPSFCNYASDTAESFNDLEQALCGALQDEPEFRGIICMSLQILVQQNKK
IVEEMNDLSDSEVGSARHRAIANYTPQVTADNLSALKSSARKLLHVLSGVFLNTTKDDAG
CLQSTIGEFASIADKEAVSRFFRNTMGKLLKVTKEASKAGTPRDSVQDKEAESPRDFNSK
RAQLFDLVVSFLPGLHEDEVDVLFSAIKNALQDDEGLIQKKAYKVLSIILRDCDSFLSSN
SSKLKELLDLMVNVLPSCHFSAKRHRLDCLYFLVVHVSKSDTEQWRDGIIIFLTEIVLAL
KEANKKTRNRAYDILVQIGHACGDEEKGGNREHLLEFFNMVAGGLAGETPHMISAAMKGL
ARLAYEFSDLVSTATNLLPSAFLLLQRKNKEIIKANLGLLKVLVAKSQAEGLQLHLKSMV
EGLLKWQDATKTHFKAKVKLLLEMLVKKCGLDAVKAVMPLEHMKLLTNIRKIKERKDRKL
GSKSEEARSQVSKATTSRLSRWNHTKIFSDFDDEETEDSDTEYTDAKTVLGKHGKAFSQL
KSKASSLRRTNKNLLDQLEDEPLDLLDRQRTRSALRSSENLKRKMESDDGPEIDDDGRLI
IRDEAESYKRKPSEPDSYARSEAGSYLSVDSKKTQKRRKTSESGWAATGKEYASKKAGGD
LKRKDKLEPYAYWPLDRKMMSRRPEHRAAARKGISSVVKMTKKLEGKSVSTILATKGLKF
KNKSRVQKKGGSKKKK
NT seq
3831 nt
NT seq
+upstream
nt +downstream
nt
atggaaggcatcgaaatggacgacggttgcactctccccctgatcgaagacgacgacatc
tgcacctcaatactcgcgcgcttcggcaactccacgcgcgaggaccaccaccacctctgc
gcagccataggtgccatggctcaggagctcaaagacaagaacctcccttcgaccccggtc
gcctacttgggcttcacgtgctcttctctcgacggcctctcctcccagctcgagcctccc
gctcatgtgatcgacgccctcctcacaattctctccattgtctttcaaaaagtctcggcc
gcaattctcgtgaagaagtcggagttcctatcggagctcttggtgcgtgttctgcggtct
ccgtctttgacagtgggcgccgccgtctcaggattgaaatgcatatcgcatctgcttatc
atcagaggccgtgtcaactggtctgatgtgtcttcattgtatggcttcttattgagcttt
attacagattcccgccctaaggtgagaagacaatcacaattgtgtcttcgtgatgtactg
caaagttttcaaggaacaccgctgctcgcccttgcaagtgaaggggttactaacctattt
gaaaggtttcttctgcttgctggtgggtcaaatgcagatgcgggtgaaggacccaaggga
gctcaggaggtcttgtatattttggatgctttgaaagagtgtctttttcttatgtcaatc
aagtacaaaacttccgtcctcaagtactacaaaactctcttggaactgcaccaaccactt
gttacaaagcgcataacagatagtttgaatatactttgtctcaatccatctacagacgtt
tctcctgaagtgttgctcgatctgttatgctcattagctctttctgtctccacaaatgag
actgctgtcgatgggatgacattcacagctcgcttgcttggtagtggaatggccaaagtt
tattccctcaataggcatatatgcgttgttaaactccctattgtattcaatgcactcaga
gatgtattggcatctgagcacgaagaggccgtacacgcagcagcgcatacatttaagagt
ctcattcatgcttgcattgatgaaagcttgatcaaacagggagttgaccagattgtaatg
aatgcaaatctggatgcaaggaagtctgggccaactataattgaaaaagtatgtgctact
attgaaagcttacttggttatcactatgctggtgtctgggaccttgcattccaagttgtt
tcagcaatgttcgataaattaggggtatatgcttcttatttcatgaggggtgcgctcagg
agcttggcagagatggagaagttatctgatgaagatttccctttcaggaaacagctgcat
gaatgccttggatcagctcttgttgcaatgggacctgaaacatttttaggtcttctacct
cttaatttggaggctgaagactcaactcaggtgaatgtttggctctttccgatactgaag
cagcatactattggtgcacgtttgagcttctttagagagtcaattttgggtatggttcga
acgataaaggagaaatctagaaagctcgagtcacaaggacgtattttttcatcaaggagt
acagatgcacttgtacatgctttgtggtcactgttaccttcattttgcaactacgcttca
gatactgctgaaagtttcaacgatctagagcaagccttgtgcggtgcccttcaagatgaa
cctgagtttcgtggaataatatgcatgagcttgcagattcttgtacaacaaaataagaaa
attgtggaagaaatgaatgatctgtctgatagtgaagtaggtagtgccagacacagagct
attgctaattatactcctcaggttacagcagataatttaagcgcgctcaagtcatctgct
cgcaagttactgcatgttctatcaggtgttttcttgaataccacaaaagatgatgcaggc
tgtttgcagtccacaattggtgagtttgcttcaatagcagataaagaagctgtgtcaagg
tttttccgaaatacaatgggaaagcttttaaaggttactaaagaggctagcaaagcagga
actcctagagattctgtccaagataaagaagcagaaagtcctagagattttaattccaag
cgggcacaactgtttgacttggtagtctcatttttacctggtttacatgaagatgaggtt
gatgttctatttagtgcaataaagaatgcgttacaggatgatgaaggtttgatacaaaag
aaggcatataaagttctttcaatcattctcagggactgtgattcgtttctttcatcgaat
tcatcgaagctcaaggaattgcttgaccttatggttaatgtgctgccttcatgccatttt
tcagctaaacggcacagactcgactgcttgtacttcctagtagtccatgtttcaaagagt
gacacagagcagtggcgggatggcatcataattttcctgacagaaatagttcttgcactt
aaagaggctaacaaaaagacaagaaatagagcttatgatatccttgtccaaattggccac
gcctgtggtgatgaggagaaaggcgggaatagagaacacctgttggaattttttaacatg
gtagctgggggcctagctggtgaaactcctcatatgatcagtgctgcaatgaagggctta
gctcggttggcttatgagttttctgatcttgtttcaactgctaccaatttgcttccgtcc
gcatttctactcctccagagaaagaacaaagaaataattaaagctaatttaggtttgttg
aaggtattagtggccaaatcacaagccgaggggttgcaattgcacttgaaaagcatggtg
gaaggcttgctgaagtggcaagatgctactaaaacccacttcaaagccaaggttaagctt
cttctagaaatgcttgtcaagaaatgtgggctcgatgctgttaaggctgtgatgcctcta
gaacatatgaaattacttaccaacataaggaagatcaaggaacggaaagacaggaaactg
ggttctaaatctgaggaagctagatctcaagtttccaaagcaactacatccaggttaagc
aggtggaaccatacaaaaatattttcggattttgatgatgaagaaactgaggatagcgat
acagaatatacggatgccaaaacagtcttgggcaaacatggcaaggctttctcacagctc
aaatccaaagcatcttcattacgaagaacaaataagaacttgcttgatcaactagaagat
gagccactcgacttgcttgatcggcaaagaacaaggtcagcacttagatcatccgagaat
ttaaagcgaaaaatggagtcggatgatgggccagagatagacgatgatgggcgcctaata
attcgtgatgaagcagaatcgtacaagagaaagccatcggaacctgattcatatgctaga
agtgaagcgggtagttacttgtccgtagactcaaagaaaacacagaagcggcggaagaca
tcagagtccgggtgggctgccaccggcaaagagtacgccagcaagaaggctggtggggat
ttgaagaggaaggacaaacttgaaccgtatgcatattggccgcttgatcgaaaaatgatg
agccgtaggccggagcatagggcagctgcaagaaaagggatatcaagtgtggtgaagatg
acaaagaagctggaagggaagagtgtctcaactattctcgccactaaaggcttaaagttt
aagaataaaagtagggttcagaagaaaggaggcagcaagaagaaaaagtag
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integrated database retrieval system