Prunus avium (sweet cherry): 110749213
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Entry
110749213 CDS
T05161
Name
(RefSeq) sm-like protein LSM1B
KO
K12620
U6 snRNA-associated Sm-like protein LSm1
Organism
pavi
Prunus avium (sweet cherry)
Pathway
pavi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pavi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
110749213
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pavi03019
]
110749213
Messenger RNA biogenesis [BR:
pavi03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
110749213
mRNA degradation factors
5'-3' decay
Lsm complex
110749213
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Hfq
Motif
Other DBs
NCBI-GeneID:
110749213
NCBI-ProteinID:
XP_021804964
UniProt:
A0A6P5RPS1
LinkDB
All DBs
Position
Unknown
AA seq
128 aa
AA seq
DB search
MSWAGAEDTFLSTSLASYLDKKLLVLLRDGRKLLGLLRSFDQFANVVLEGACERVIVGDL
YCDIPLGLYVIRGENVVLIGELELGKEELPPHMTLVPEAEIKRAQKAERDATDLKGSMRK
RMEFLDFD
NT seq
387 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtgggctggcgcagaagacactttcctttccacttctcttgcaagctatcttgac
aaaaagcttcttgtcttattgcgagatggccgaaagctcttgggattactacggtctttt
gatcagtttgctaatgttgttcttgaaggtgcatgtgaacgagttattgtcggtgatctt
tactgtgacatcccattaggtctgtatgtaatccgtggggagaatgtcgtcttaattgga
gagctggaattgggtaaggaggagcttcctccacatatgactctagtaccagaagcagag
ataaaaagggctcagaaagcagagagggatgctacagatttaaaaggctccatgagaaaa
agaatggagttcctcgattttgattaa
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integrated database retrieval system