KEGG   Prunus avium (sweet cherry): 110749213
Entry
110749213         CDS       T05161                                 
Name
(RefSeq) sm-like protein LSM1B
  KO
K12620  U6 snRNA-associated Sm-like protein LSm1
Organism
pavi  Prunus avium (sweet cherry)
Pathway
pavi03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:pavi00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    110749213
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pavi03019]
    110749213
Messenger RNA biogenesis [BR:pavi03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     110749213
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     110749213
SSDB
Motif
Pfam: LSM Hfq
Other DBs
NCBI-GeneID: 110749213
NCBI-ProteinID: XP_021804964
UniProt: A0A6P5RPS1
LinkDB
Position
Unknown
AA seq 128 aa
MSWAGAEDTFLSTSLASYLDKKLLVLLRDGRKLLGLLRSFDQFANVVLEGACERVIVGDL
YCDIPLGLYVIRGENVVLIGELELGKEELPPHMTLVPEAEIKRAQKAERDATDLKGSMRK
RMEFLDFD
NT seq 387 nt   +upstreamnt  +downstreamnt
atgtcgtgggctggcgcagaagacactttcctttccacttctcttgcaagctatcttgac
aaaaagcttcttgtcttattgcgagatggccgaaagctcttgggattactacggtctttt
gatcagtttgctaatgttgttcttgaaggtgcatgtgaacgagttattgtcggtgatctt
tactgtgacatcccattaggtctgtatgtaatccgtggggagaatgtcgtcttaattgga
gagctggaattgggtaaggaggagcttcctccacatatgactctagtaccagaagcagag
ataaaaagggctcagaaagcagagagggatgctacagatttaaaaggctccatgagaaaa
agaatggagttcctcgattttgattaa

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