Prunus avium (sweet cherry): 110749340
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Entry
110749340 CDS
T05161
Name
(RefSeq) bromodomain and WD repeat-containing protein 3
KO
K11797
PH-interacting protein
Organism
pavi
Prunus avium (sweet cherry)
Brite
KEGG Orthology (KO) [BR:
pavi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pavi04121
]
110749340
Ubiquitin system [BR:
pavi04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
110749340
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_WDR75_1st
Beta-prop_EML_2
Beta-prop_SCAP
Beta-prop_CAF1B_HIR1
Beta-prop_EML
WD40_MABP1-WDR62_2nd
WDR55
NBCH_WD40
Beta-prop_TEP1_C
Beta-prop_IFT122_1st
WD40_MABP1-WDR62_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_DCAF4
Bromodomain
Beta-prop_RIG_2nd
VPS8_N
Beta-prop_EIPR1
Beta-prop_HPS5
WDR90_beta-prop_4th
Beta-prop_SPT8
Beta-prop_WDR35_TULP_N
WD_LRWD1
Auxin_resp
Motif
Other DBs
NCBI-GeneID:
110749340
NCBI-ProteinID:
XP_021805118
UniProt:
A0A6P5RTN9
LinkDB
All DBs
Position
Unknown
AA seq
1647 aa
AA seq
DB search
MDPWKCTLSGGANSLSMAPSSILNKVNEKAQPEKEERDTGHVVEAGVDIDIREVYFLIMH
FLSVGPCQRTFEQFGNDLLEHQLLPRRYHAWFSRSGVGSGNNNDDAISFPLSYNKLVERY
PHIERDHLVKLLKQLILSIATPLHGKVGRSSPNAADVPTLLGTGSFSLLDCDRTTENKRV
KPLPAHLRWPYMQADQVHGLSLREIGGGFTKHHRAPSIRSACYAIAKPSTMVQKMNNKKK
LRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETALCLASCRGHEGDITDLAVSSNNA
LVASASNDFAIRVWRLPDGFPISVLQGHTGAVTAIAFSPRLSAVYQLLSSSDDGTCRIWD
ARSSQYPPRIYMPQPSDTLTGRSNAISSTGPSSSNGPQSHQILCCAYNANGTVFVTGSSD
TFARVWNALKSNTDDSEQPIHELDVLSGHENDVNYVQFSGCAIPSKSSFSDSVKEESNMK
FKNSWFRHNNIVTCSRDGSAIIWVPRSHRSHGKVGRWTRAYHLKVPPPPLPPQPPRGGPR
QRFLPTPRGVNMIVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHTASSYVLDVHPF
NPRIAMSAGYDGQTIVWDIWEGMPIKIYEIGNVKLVDGKFSADGTSIVLSDDVGQVYLIN
TGEGESQKDAKYDQFFLGDYRPLARDDSGYPIDQETQLPAYRRNLQDPLCDSSMMPYPEP
YQSTYQQRRLGALGMEWHPSSMKFSIGMDTGLDYQMPPLPDLERMIEPLPDFFDAMLWEP
ENEVASEDTDSEYHGTEENSSEDEKGNITTSSSSDPDCSTEYSEAECSHKDGLRRSRRKQ
QKVESITCSERRGKKRKVDEHDGIISGIERIKNSKGGRKVSKRKPSAKTLRPQRVAARNA
RNVLSQIPGTSTDGEKDEDDSSNSDSLEQQFHIRSNGGNQMMQQKHTKEEPSVHGFEDIY
KPLAVSSSQSNVRSKPKLVFKIPLRDSKKQEAPQDVKIKYKNQADLVSPSSGYQDVTQDK
RINKGLGSSLPDVIDVELSGNLIDNEFTDPGKTAKAENSLKASPCDKDNRVGWGEVKIRT
PKHTRSGNPIPIEAATGSLASFDVYMKERNYVNWDEEHNGTDALGDLDGLKSKELSHTLI
SSSFESSALGEHKPKGIEDSLEIEEAAGTMHSDELKYNASLKFSAEHLTGYGDLMPEDPS
CMDQNLNLEMPKVSGGAGRPGSLKFFFKGRTNSEGVDGNMEENTSNVNDRHDSGIDLPEA
AMGAIRGTRTLKIKATSQGVGSVSRSLKLRWGHQTAGTSKDAEDSSVQVCDQIYQRPRST
RNRQGSYNDYDQSSSTRSMLDTPVGKLSWLMLSKHEPGYRYIPQLGDEVVYLRQGHQEYL
EVVMKSEVGPWGPWGSIKENIKAVEICKVESLDYASQPGSGESCSRMELKFVDPSSAMFG
KPWNLTLPEIDFSDFIVEKIWYDAAIRRNWTTRDKCEVWWRDSDGGGDWWEGQIVRCQAK
SHEFPDSPWLRYEIRYKNDDGITHCHCPWELRDPSILLEHPHINSESRDKLLHYFSKLEQ
KDSQTIQQMNQAVQKADFCNSFPVQLYPELIQSRLRNDYYRSLEAVEHDIMVMLSNARQY
FKRNELQARIRHLSKWFKKKLSRLQRF
NT seq
4944 nt
NT seq
+upstream
nt +downstream
nt
atggatccttggaagtgcactttgtctggtggtgcaaattctctttctatggcaccttca
agtattttaaataaggtgaatgagaaggctcaacctgaaaaggaagagagggatacaggt
catgttgttgaggctggagtcgatatagacattagagaggtttactttttgattatgcac
tttctgtctgttgggccatgccagaggacttttgaacaatttgggaatgatcttctggaa
catcagcttctacctagaaggtaccatgcttggttttcaaggagcggcgtaggaagtggc
aataataatgatgatgccatctctttcccattgagttacaacaagttggttgaaaggtat
cctcatatagagagggatcacttggtaaagcttctaaagcaactgatactgagtatagca
actcctttgcatggcaaggttggaagaagttctccgaatgcagctgatgtccctacatta
ctgggaactggttctttttcacttctagattgtgataggactacggaaaataagagagtt
aagcccctgccagctcacctgcgttggccttacatgcaggctgaccaagttcatgggctt
agtttgagggaaattggaggaggtttcacaaagcatcatcgtgctccatcaattcgctct
gcttgttatgctattgctaaaccatcaactatggtgcaaaagatgaacaacaaaaagaag
ctacgggggcaccgtaatgctgtctattgcgccatttttgatcggtctgggagatatgtt
atcactggttcggatgatcgccttgtcaaaatttggtcaatggaaactgcgctttgcttg
gctagctgtcgtgggcatgagggtgacatcactgacttggctgtaagttcaaacaacgct
ttggtggcatctgcttcaaatgactttgccattcgagtttggcgtttgccagatggattt
ccaatttcagttcttcaagggcatactggagctgtgactgctattgcatttagtcccagg
cttagtgctgtttaccaacttctatcgtcatcggatgatgggacttgtcgaatctgggat
gctaggtcttcccagtaccctccacggatatacatgccacaaccttcagacactttaact
gggaggagcaatgctatttcaagtactggaccctcctcaagtaatggtccacaaagccat
cagatactctgttgtgcttacaatgccaatggaacggtttttgtcaccggtagctctgac
acttttgcaagggtctggaatgcattaaaatctaatacagatgactcagaacaaccaata
catgaattggatgtactgtcgggccatgagaatgatgtcaattatgtgcaattcagtggc
tgtgccattccttcaaaatcttcattttctgactctgtgaaggaggagagtaatatgaag
ttcaaaaattcctggtttcgtcacaacaacatagttacctgctctcgtgatggcagtgcc
attatatgggttccaagatcacacagatctcatggaaaagttggacgttggacacgtgca
tatcatttgaaagttccgcctcccccactgcctcctcagccacctcgaggaggccctcgt
cagagatttcttcccacccctcgtggtgttaatatgattgtgtggagcctggataaccgc
tttgtgctcgcagctatcatggattgcagaatttgtgtttggaatgctgttgatggtagc
ttagtacattctttgaccggtcacactgcatcttcatatgttttggatgttcatcccttt
aaccctcggattgctatgagtgctgggtatgatgggcaaacaatagtttgggatatatgg
gagggcatgcccattaagatatacgaaattggaaacgttaagttggttgatgggaagttt
tctgcggatgggacatcaatagtactctcagacgatgttggccaagtatatttaataaac
acgggtgaaggcgagtctcaaaaagatgctaaatatgatcagttcttccttggggattat
cgcccccttgcacgggatgattctggatatcctattgatcaggagacacagcttcctgct
tatcgaaggaatcttcaagatcctctctgtgattcaagtatgatgccatatcccgaacct
tatcaaagtacataccagcaacggcgactgggtgctcttggcatggaatggcatccttca
tccatgaagttctctattggcatggatacaggcctagattatcagatgcctcctttacca
gatttggaaagaatgattgagccactaccagatttttttgatgccatgttatgggagcca
gaaaatgaagttgcaagtgaagatactgattcagagtatcacggtactgaggaaaattcc
agtgaagatgagaaaggaaatatcaccaccagctcttctagcgatccggactgcagcaca
gaatacagtgaagctgaatgcagtcataaggatggccttcgccgatcaagaagaaaacaa
caaaaggttgagtcaataacctgttctgagaggcgtggcaagaaaaggaaagtggatgag
catgatggcattatatctgggattgagagaattaaaaattcaaaaggtggccggaaagtt
tcaaagagaaagccttccgcaaagacattgagaccccagcgagttgcagcacgcaatgct
cgaaatgtgctttctcagatccctggaacatctactgatggagaaaaagatgaagatgat
tcatcaaacagtgattctctagagcaacaattccacattcgaagcaatggtggtaaccag
atgatgcaacaaaaacatacgaaagaagaaccatctgtccacgggtttgaggatatatac
aagcctcttgcagtttcttcatctcagtcaaatgtcagaagcaagccaaaattggttttc
aagattccacttcgtgattctaagaagcaagaggctccgcaggatgtaaaaatcaaatat
aaaaatcaggctgatttggtgtctccatcttctggatatcaagatgtgactcaagataag
aggattaataagggtctgggttcatctttgccagatgtgattgacgtggagttgtcagga
aatctcatagacaatgaattcacagatcccgggaaaactgcaaaggctgaaaattctttg
aaggcatctccatgtgacaaggataacagagttgggtggggagaggtcaagatacgcaca
ccaaagcatacaagatcaggaaatcccataccaatagaggcagccactggatcgcttgct
agttttgatgtctatatgaaagagaggaattatgtcaattgggatgaggaacataatgga
actgatgcattaggggatctggacggtctcaaaagtaaagagctttctcatacactcata
tcgtcatcttttgagtcctcagctttgggcgagcacaaaccaaaaggcatagaggactcc
ctggagatagaggaggctgctggaacaatgcactctgatgaattaaagtataatgcttcc
cttaagttttctgcagaacacctaacaggttatggagatttaatgccagaagatccttca
tgcatggaccagaatttaaatctggaaatgccaaaagtgagtggaggtgctggcagacca
ggttctttgaagttttttttcaagggtaggactaattcagaaggtgttgatggtaatatg
gaagaaaatacttcaaatgtcaacgaccgtcatgattcagggattgatctccctgaagct
gcaatgggtgcaatacgtggaacaagaacattaaagatcaaggcaacttcacagggggtg
ggctctgtgagccgtagccttaagttgagatggggccatcaaacagcggggacatcaaaa
gatgcagaagactcctccgtccaagtgtgtgatcagatatatcaaagaccaaggtctaca
agaaatcgtcagggttcatataatgattatgaccaaagttcttcaacccgaagcatgtta
gatacccctgttggaaagttgtcatggctgatgttgtcaaaacatgagccgggttaccgt
tacattcctcagctaggtgatgaagtggtgtacctgagacagggccatcaagagtatcta
gaagtagttatgaaatcagaagtgggtccttggggtccttggggatcaattaaggaaaac
atcaaagctgtggaaatttgcaaggttgaaagccttgattatgcttcgcagcctggttct
ggcgagagctgcagtagaatggaacttaaatttgtagacccttcttctgctatgtttggt
aaaccatggaatttaactttgcctgaaattgatttcagtgatttcattgttgagaaaata
tggtatgatgctgctattagaagaaactggaccactagggacaaatgtgaggtttggtgg
agggattcagatggaggtggggattggtgggaaggtcaaattgttcgttgtcaggccaaa
tcacatgagtttcccgacagcccttggttaagatatgagattcggtacaagaatgatgat
gggataacccattgtcattgtccttgggaactgcgtgatccatccatattattggaacac
ccccatattaattctgaaagcagagataagctgctgcactatttttctaaattggagcag
aaggactcccaaacaatccaacaaatgaatcaagctgttcagaaggcggatttctgcaac
agctttcctgtgcaattgtacccggaactaatccagtcaaggttaaggaatgactattat
agaagcttggaagctgtggagcatgatataatggttatgctgtcaaatgcgaggcagtac
ttcaagagaaatgaattgcaagcccggattaggcacctctcaaaatggtttaagaaaaaa
ctgtcaagattgcagaggttttga
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integrated database retrieval system
