Prunus avium (sweet cherry): 110749403
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Entry
110749403 CDS
T05161
Name
(RefSeq) BRCT domain-containing protein At4g02110 isoform X1
KO
K10728
topoisomerase (DNA) II binding protein 1
Organism
pavi
Prunus avium (sweet cherry)
Pathway
pavi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pavi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
110749403
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pavi03032
]
110749403
03400 DNA repair and recombination proteins [BR:
pavi03400
]
110749403
DNA replication proteins [BR:
pavi03032
]
Eukaryotic type
DNA Replication Initiation Factors
Other initiation factors
110749403
DNA repair and recombination proteins [BR:
pavi03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
110749403
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BRCT
PTCB-BRCT
BRCT_2
PHD
RTT107_BRCT_5
DUF1889
Zn_ribbon_RanBP
Motif
Other DBs
NCBI-GeneID:
110749403
NCBI-ProteinID:
XP_021805203
UniProt:
A0A6P5RU02
LinkDB
All DBs
Position
Unknown
AA seq
1298 aa
AA seq
DB search
MSEGNSPSKTFLGVRFILLGFDPLHEQKVRSKLVGCGAVDVGHYSLNCSHVVVDKTVFDD
PICVAARNDGKTLVTALWVHHSFDVGVPVESTSIIYRPLKDLNGIPDAKSLIVCLTGYQR
QDRDDIMTMVGLMGAQFSKPLVANKVTHLICYKFEGEKYELAKKIPKIKLVNHRWLEDCL
RDWALLPEDDYNKSGYEMEMMEAEARDSEDEAENTIMKQSGGRNMHKSPLNIKSPPATSA
MPKSEGNVPKVPMNFYNAMDHVLIPQNENKLGQASSFSSAYVSNGVSCQNACKFRDGTDG
ELNDLHHRTPDPKVRDDLTSNFGTAETPAHSARTLSYSRQTPLKSTLPLHVGDKSSNGSV
SSKVPICKSNANFGLASYTFKADQENNKIDSSCVEVPLKGIHSQNGEESSGILPRKRTMD
LSYGSSKSQKMNHDAEAGIICSPSSSDKSPKVKPTSMVDGSYETTSHYVIRNDDRSLDKT
GNLSAVESSYAGISPTKSSTVIRKPLACDLPFSATVTSETAEDGNGNKKTPLTTFQRLRK
SSLSSKPGIVDCVVEKLTFAVSKTVELQNQHQDVEGLSSNNKKSVTSNSNDPASLNLLKD
GNNHLDTKSVSKRMISKKILVSRPKLTSANQKGSVCLGEDASLNDTTFHLNSGDHEKSPG
AMKLDMLYPGAAAEPPKEVEGKDVTMTADVAENNVQSMDDETEAPEEESEHKLKNVLHEA
KAIGVQSTSKCITTKEKSEGMQQISDHSDACVHGDAMASAENTDGNERETTVSDRISLLV
ESSSEGDGVKGKKNKGKKRDLGKTKFKAVPAVADVMKPKKFVSEEDTQNENIGETQKEPE
KIVGKSKRHSVPKNKLENSSKMKENRPIVCGDQSVSTAEQQAGKSTEDTQNENIGETEKE
LEKIVGKSKRSSVPKNKLENSSKMKENRPIVCGDQSVSTAEQQAGKSTVKSNITPLKINH
SSVEISPNSSIPEGKAPSNIKTEPVWFILSGAKFQRKDFRQVIRCLKGRCCRDSHHWSYQ
ATHFIAPGPIKRTEKFFAATASGRWILRSDYLAASNQAGRFLAEEPYEWHQNGLSEDGAI
NLEAPRKWRLLRERTGHGAFHGMRIIIYGECIAPPLDTLKRVVKAGDGTILATCPPYTRF
LDSGVDFAIVSPGMPRVDMWVQEFLKHEIPCVATDYLVEYVCKPGYPLERHVLHNTHAWA
ENSFGRLQRRAEEIVEDVFAPQDSSGSSDIPCVVCGSVERGEVMLICGNESGSVGCGVGT
HMDCCNPPLEDVPEGDWLCPKCSRSKNSTSSSKKRKKG
NT seq
3897 nt
NT seq
+upstream
nt +downstream
nt
atgtcggagggcaattctccgtcgaaaacgtttctcggcgtccgtttcattctcttggga
ttcgacccccttcacgagcagaaggttcgatctaagcttgtgggttgtggcgcggtggat
gtcggccactattccctgaattgcagtcatgtggttgtggataaaactgtgtttgatgat
cccatatgtgttgctgcccgaaatgacggcaaaacacttgtcacggctttatgggttcat
cacagttttgatgtcggagtgcccgttgagtctacttctattatatacagacctcttaaa
gatttgaatggtattccggatgccaagagtttaattgtatgcttgactggatatcagcga
caagatagagatgacattatgacaatggtgggtttaatgggtgctcaattttctaagccc
ttggtggctaacaaagtcactcatctcatatgctacaaatttgagggggagaagtatgaa
cttgccaagaaaatcccaaagataaagctggtcaaccatcgctggttggaagattgctta
agggattgggcgctccttcctgaagatgattataacaagagtggctatgagatggagatg
atggaagctgaggctagagattcagaagatgaggctgaaaacaccattatgaagcaatct
ggggggagaaacatgcataagagtcctcttaatataaaaagtcccccagcaacatctgcg
atgcctaagtcagaaggaaacgtgcctaaggttcccatgaatttttataatgctatggac
catgtattgattcctcagaatgagaataaattaggtcaagcctcaagcttttctagtgct
tatgtttccaacggagtaagctgtcagaatgcatgcaaatttagggatggtacagatggt
gagctaaatgacctacatcacagaactccagatcctaaggtgagagatgatttgacatct
aattttggaactgctgaaacgcctgctcattctgctaggaccctaagctactcaaggcaa
accccattgaagtcaacacttccactgcacgtgggagataaatcaagcaatggaagtgtg
tcttctaaagtacccatttgcaaatcaaatgccaattttggtttagcctcttataccttt
aaggcagatcaagaaaataacaaaattgactccagttgtgttgaagtccccttaaaagga
attcattcacagaatggagaagaatcaagtggtatattgcctcggaaaaggacgatggat
ctttcttatggtagctccaaatcacagaagatgaatcatgatgcagaagcaggcattatt
tgtagtccttcatcaagtgataaatctccaaaagtaaagccaacatctatggttgatggt
tcatatgagactactagccattatgtcatcagaaatgatgaccgctctctggataagact
ggcaatttgagtgctgtagaaagctcatatgctggtatttcaccaaccaaatcatctact
gttatccggaagccattggcatgtgatctgcctttctctgcaactgtgacctctgagaca
gcggaagatggaaatggcaacaagaaaacacctctaaccacttttcaaagattaagaaag
tccagcttatccagcaagcctggtattgtagattgtgttgtggaaaaactgacatttgca
gtcagcaaaacagtggaactgcaaaatcagcatcaagatgttgagggtctgtcttcaaat
aacaaaaagtcagtgactagtaattccaacgaccctgctagtttgaacttgcttaaagat
ggaaataatcacttagatacaaaatcagtaagcaagaggatgatttccaagaagatcctg
gtttctaggcctaagttaacttctgctaaccaaaaggggtctgtgtgcttaggtgaagat
gcctctttaaatgataccacttttcatttaaattcaggggaccatgagaaatcccctggt
gctatgaagcttgacatgctttatccaggtgctgctgcggaacccccaaaggaggtggag
ggaaaagatgttaccatgactgcagatgttgctgagaataatgttcaatctatggatgat
gaaactgaggctcctgaggaagaaagtgaacataagttaaagaatgtacttcatgaagca
aaggctataggggttcaatccacaagtaaatgtatcactaccaaagagaaatcagaaggg
atgcagcagatatcggatcactctgatgcctgtgttcatggtgatgcaatggcctcagca
gaaaatacagatggaaatgaacgagaaacgacagtttctgacaggatttccttgctggtt
gagtcaagctcagaaggagacggtgtcaaaggaaagaagaacaaagggaaaaagcgtgat
ttgggtaaaaccaagtttaaagctgttcctgctgtggctgatgtcatgaaacctaagaaa
tttgtctctgaggaagatactcagaatgagaatattggggagacacagaaggaaccggaa
aaaatagtaggcaaatctaagcgccatagtgtgcccaaaaataagttagagaactcttcc
aaaatgaaggaaaacaggccaattgtttgtggggatcaatctgtaagtacggccgaacag
caggcaggaaaatcaacggaagatactcagaatgagaatattggggagacagagaaggaa
ctggaaaaaatagtaggcaaatccaagcgcagtagtgtgcccaaaaataagttagagaac
tcttccaaaatgaaggaaaacaggccgattgtttgtggtgatcaatctgtaagtacggcc
gaacagcaggcaggaaaatcaacggttaaatctaatataactccattgaagataaatcat
tcatctgtagagatcagtcctaattcttcaataccagaggggaaggctccaagcaacatt
aaaactgaacctgtatggtttattttgagtggggccaaatttcaaagaaaggactttcgg
caagttatcaggtgtttgaaaggaagatgttgccgtgattctcatcactggtcttaccag
gcaacacacttcatagctccaggtccaataaagaggacagagaagttttttgctgctaca
gcatctggaaggtggattcttaggagtgattatttggcagctagtaatcaggcaggaaga
tttttggcagaggaaccttatgaatggcaccagaatggccttagtgaagacggtgcaatc
aatttggaggctccaaggaagtggcggctcttgagagagagaacgggccatggtgccttc
cacggaatgcgcattatcatatacggtgaatgtattgcaccacctttggatactctgaag
cgtgttgtgaaggctggtgacgggacaatattggcaacttgtcctccttacactcgattt
ctcgactcgggggttgactttgccattgtcagcccaggcatgccacgggttgatatgtgg
gtacaagagttcttgaaacatgagataccttgcgttgcaacagattacttggttgagtat
gtgtgcaaacctgggtacccacttgaaagacatgtgctgcacaatactcatgcatgggca
gaaaattcgtttgggaggctgcagaggagggcagaagagattgtcgaagacgtttttgca
cctcaggatagttctggtagtagtgatataccttgcgtggtttgcggatctgtagagaga
ggagaggtgatgctgatatgtggcaacgaaagtggttctgttggctgtggggttggtact
catatggactgctgcaatccgccacttgaggatgttccggagggtgattggctttgtcca
aagtgtagtcggagcaaaaacagcaccagctcttccaagaaaaggaaaaagggttag
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integrated database retrieval system
