Prunus avium (sweet cherry): 110749536
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Entry
110749536 CDS
T05161
Name
(RefSeq) ATP-dependent RNA helicase DEAH13
KO
K14780
ATP-dependent RNA helicase DHX37/DHR1 [EC:
5.6.2.6
]
Organism
pavi
Prunus avium (sweet cherry)
Brite
KEGG Orthology (KO) [BR:
pavi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pavi03009
]
110749536
Enzymes [BR:
pavi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
110749536
Ribosome biogenesis [BR:
pavi03009
]
Eukaryotic type
90S particles
Helicases
110749536
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
DHX37_C
Helicase_C
HA2_N
HA2_C
DEAD
AAA_22
nSTAND3
ATPase
Motif
Other DBs
NCBI-GeneID:
110749536
NCBI-ProteinID:
XP_021805338
UniProt:
A0A6P5RUD2
LinkDB
All DBs
Position
Unknown
AA seq
1339 aa
AA seq
DB search
MRSKLDFPMENCAQHMDLSLGGGDSNTLILPAKRRNKRKGTNQDCEKLNKRKATMISKSQ
QRKLKKLEEEKEKSLSKSKSIEALEKYMLPVGAHSLLQSSKNIGKVETKKEKCRKAVLFS
KAGFGVPLTDQPFNKNQIDSESESEPELEKTQSRSDLCKNDQVQSKIVPAEIQKNTFISL
DSSQGLVCGRGLGVNGGSAADSPYKNAISNKHDTSLREDINILPTSSVNDDSQSMKMDKV
KETPNVNFSGMSKLSNSPTPRSLIAPTIVHVSRPEEVENARKDLPIVMMEQEIMEAVNDH
STVIICGETGCGKTTQVPQFLFEAGFGSSFSCVRSGIIGVTQPRRVAVLATAKRVAYELG
LHLGKEVGFQVRYDKRIGESCSIKFMTDGILLRELQNDFLLKRYSVIILDEAHERSLNTD
ILIGMLSRVIRAREEKYAEQQREVLSGRTISTGQQIFPLKLVLMSATLRVEDFMSGRKLF
HNPPPVIEVPTRQFPVTIYFSSRTKEEDYIGQACKKVLAIHKTLPRGGILVFVTGQREVE
YLCRKLHRVSKEQFKKTSEGDIRSDVTEVSERSSTEEIDMKEINEAFEVHGNSADHQTDR
FSYNDEDQFDIDDDELDDSYDSETESELEIIGEYGDSLIQASPEIDGDVENVLGEEGGIT
QLKAAFEALDAKTSFNFNSDEKQPISVTPNACHNQSNPSMGKKSGVEENTSPGTLHVLPL
YAMLHAKDQLRVFEEVREGERLVVVATNVAETSLTIPGIKYVVDTGREKVKRYNSSNGME
TYEVQWISKASAAQRAGRAGRTGPGYCYRLYSSAAYSNIFLDFSLAEISKVPVDGVVLYM
KSMNIDKVSNFPFPTPPEGAALDEAERCLKILQALDSNGRLTPLGKAMADFPMSPRHSRM
LLTIIRVMSKEKSYSRANLVLAYAVAAAAALSLSNPFVRQFEDSDTKSQDLDEDGNSSGT
VNIEVMDKQEKLRRKKLKETVKMFREKFSNPSSDALSVAYALQCYELSESPVEFCNVNAL
HLKTMEEMSKLRKQLLQLVFNQSGVSDGQKDFSWIFGSLKDVENVWRVSHDKNPLLLYEE
ELLGQAICAGWADRVAKRIRGSSGLSLGDKKVHAVRYQACMVKEIVFLHRWSSVSNSAPE
FLVYSELIQTRRPYMHGVTSVKSEWLVEYARSLCTFSAPLTDTKPYYEPLTDQVLHYVIP
AFGPHLWELPSHSIAISNYAFRVAVFAYALLEGQVLPCLRSVHKYMAAPPASVLRPEAAG
QRRVGSLLAKLNRKKIDNCAMLREVWKENPKELHPEIMDWFQEGFHNNFKTLWSHMLNEV
ILEPQDRFPKTSKRVKVKK
NT seq
4020 nt
NT seq
+upstream
nt +downstream
nt
atgaggagcaaactggactttcccatggagaattgtgcacagcatatggacttgagcttg
ggaggtggtgatagcaacaccctcatcttgccagcaaagagaaggaacaaaaggaagggc
accaatcaggattgtgaaaaactcaataaaagaaaagcaacaatgattagcaaatcccag
caaaggaagctgaagaagttggaggaggagaaggaaaaatccctttccaaatccaaaagc
attgaggccttagagaaatatatgcttccagtgggtgcacattctcttttgcagtcatca
aagaatattggcaaggttgagactaaaaaggaaaaatgtaggaaggctgtactattctcc
aaagctggctttggtgttccccttactgaccaaccatttaacaagaatcagatagatagt
gaaagtgaaagtgaacctgagttagaaaaaactcaatcaaggtcagatctttgcaagaat
gatcaggtgcaatcaaagatagtcccagcagaaatccaaaagaacacatttatttctttg
gactcatctcagggtctagtctgtggcagaggacttggcgtgaatggtggaagtgctgct
gactcaccatataaaaatgctattagcaacaaacatgacacatctttgcgagaagacata
aacattttgcccacttcaagtgtgaatgatgatagtcaaagcatgaagatggacaaagta
aaagaaacaccaaatgtaaatttcagcgggatgagtaaattatcaaattctcctacaccg
aggtctctaatcgccccaactatagtgcatgtatcaaggcctgaggaagttgaaaatgca
aggaaggatcttccaatagtaatgatggagcaggagataatggaggctgttaatgaccat
tccactgttattatatgtggagagactgggtgtggtaaaaccacccaagttccacagttt
ctttttgaagccggctttggttcaagcttctcttgtgtccgaagtggtataattggtgtt
actcaacctcgtcgtgttgcagtccttgcgactgctaagcgagtggcatatgagcttggt
ctacatttaggtaaagaggtcgggtttcaagttaggtatgacaaaaggatcggtgaaagt
tgctccatcaagttcatgacagatggaatattactacgggaacttcagaatgactttttg
ctgaagcgatactctgtcataattcttgacgaggctcatgagcggagcttgaacactgac
attcttatcggaatgctttcacgcgtaattcgtgctcgcgaggaaaaatatgcagagcag
caacgggaggtgctttcaggaagaactataagtactggccaacagatttttccattgaag
cttgttctgatgagtgccaccttgcgagtggaagacttcatgtctggtagaaagctgttt
cacaatcctccgccagttatagaagttcccaccagacaatttcctgtaaccatttacttt
tcaagcagaaccaaggaagaggattatattgggcaagcatgtaaaaaagtcttggcaatt
cacaagacgctgccacgcgggggcatacttgtctttgtcactgggcagagggaagtagag
tatttgtgtcgaaagctacatagagtttcgaaggaacagtttaaaaaaacatctgaaggg
gatattaggagtgatgtcactgaagtttctgaaagaagttctactgaggaaatagacatg
aaggagatcaatgaagcatttgaggttcatggaaattcagctgaccatcaaactgacaga
tttagctataatgatgaagatcagtttgatatagatgacgatgagttggatgattcatat
gattcagaaacagagagtgaactggaaattattggtgagtatggtgactcattgatccaa
gctagcccggaaattgatggtgatgttgaaaatgttttaggagaggaagggggcattact
caactgaaggccgcttttgaagctttagatgcaaaaacttcatttaacttcaactctgat
gagaaacaacctatttcagttactccaaatgcttgccacaaccaatccaatcctagcatg
ggaaaaaagagtggagttgaagagaatacttcgccaggtacattgcatgttctccctctt
tatgccatgctccatgcgaaagatcagcttcgtgtatttgaagaagtcagggaaggagaa
cggctcgttgttgtggccaccaatgtggctgaaacatctttaactatacctgggataaag
tacgttgtcgatactggaagagagaaagtgaaaaggtacaattcctcaaatggcatggaa
acatatgaagtacagtggataagtaaggcatcagctgctcaacgtgcaggaagagctgga
agaaccgggcctggatactgttaccgtctgtattcttctgcagcatatagtaacattttt
cttgacttttctctggctgaaatatctaaagtccctgttgatggtgttgtactttacatg
aaatccatgaatattgataaggtatccaattttccatttccaactcctccagagggtgct
gccttggatgaagctgagcgttgcttaaagatccttcaagcacttgacagcaatggaaga
ctgacacctttagggaaggccatggctgattttcccatgagtcctcgccactctaggatg
ctccttaccattattcgagtaatgagtaaggagaagagttactctagggctaatttagtg
ctagcatacgcagttgcagcagcagctgctttgagtttgtcaaatccttttgtcaggcag
tttgaagatagtgacacaaaaagccaagacttagatgaggacggaaattccagtgggact
gtgaacattgaagttatggacaagcaagagaagttgagaaggaagaaactaaaagaaact
gtaaaaatgtttcgtgaaaaattttctaatcccagcagtgatgctctgtctgtagcttat
gctttgcagtgctatgaactttcggagagcccagtggaattctgtaatgtcaatgctcta
cacctgaaaacaatggaggaaatgtccaagctgagaaagcaactactccaacttgtcttt
aaccaaagtggtgtttctgatgggcagaaggatttttcatggatttttggaagtctaaaa
gatgtagaaaatgtttggagggtttcccatgataagaacccactattattgtatgaggaa
gagctcctaggtcaagctatctgcgctggttgggcagatagggttgccaaacgcattaga
ggaagttccgggttatctttaggagataaaaaagttcatgcagttcggtatcaagcctgc
atggttaaagagattgtgttcctccaccgttggtcatctgtttctaattcagcccctgag
tttttggtatacagtgagttgatacagacaagacgtccgtacatgcacggtgttactagt
gtgaaatcagaatggcttgttgagtatgctcggtctctatgcactttctctgcaccccta
acagataccaaaccttactatgagcctctaactgaccaagtattacattatgtcattcca
gcctttggtcctcatttatgggagcttccatcacatagtattgcaattagtaattatgca
tttcgagtggcagtttttgcttatgctttgcttgaaggccaggttttgccatgtttaaga
tctgttcataagtatatggcagcccctcctgctagtgttttaaggccagaggcagcaggt
caaagacgggttgggagtcttttggctaagctgaatagaaaaaagatagacaactgtgct
atgttaagagaggtctggaaggagaatcccaaggaattgcatccagaaatcatggactgg
tttcaggagggtttccacaataatttcaaaactctttggtcacatatgcttaatgaagta
attttagagccccaagatcgattcccgaagacatcaaagagagttaaagtgaaaaaataa
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