Prunus avium (sweet cherry): 110749734
Help
Entry
110749734 CDS
T05161
Name
(RefSeq) clathrin heavy chain 1 isoform X1
KO
K04646
clathrin heavy chain
Organism
pavi
Prunus avium (sweet cherry)
Pathway
pavi04142
Lysosome
pavi04144
Endocytosis
pavi05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
pavi00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
110749734
04142 Lysosome
110749734
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
110749734
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pavi04131
]
110749734
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pavi04147
]
110749734
Membrane trafficking [BR:
pavi04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
110749734
Exosome [BR:
pavi04147
]
Exosomal proteins
Proteins found in most exosomes
110749734
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_COPA_B
Motif
Other DBs
NCBI-GeneID:
110749734
NCBI-ProteinID:
XP_021805595
UniProt:
A0A6P5RL36
LinkDB
All DBs
Position
Unknown
AA seq
1729 aa
AA seq
DB search
MAAANAPITMKEALTLPSVGINPQFITFTHVTMESDKYICVRETSPQNSIVIIDMSMPMQ
PLRRPITADSALMNPNSKILALKAQVQGTTQDHLQIFNIEMKAKLKSHLMPEQIVFWKWI
TPKMLGLVTQTTVYHWSIEGESEPVKVFERTANLANNQIINYRCDPSEKWLVLVGIAPGA
PERPQLVKGNLQLFSVDQQRSQALEAHAASFAQYKVPGNENPSTLISFATKTLNAGQITS
KLHVIELGAQPGKPSFTKKQADLFFPPDFADDFPVAMQMSHKYSLIYVITKLGLLFVYDL
ETASAVYRNRISPDPIFLTTEASSVGGFYAVNRRGQVLLATINEQTIVPFVSGQLNNLEL
AVNLAKRGNLPGAENLVVQRFQELFAQTKYKEAAELAAESPQGILRTPDTVAKFQSVPVQ
TGQTPPLLQYFGTLLTRGKLNAFESLELSRLVVNQNKKNLLENWLAEDKLECSEELGDLV
KTVDNDLALKIYIKARATPKVVAAFAERREFDKILIYSKQVGYTPDYLFLLQTILRADPQ
GAVNFALMMSQMEGGCPVDYNTITDLFLQRNLIREATAFLLDVLKPNLPEHAFLQTKVLE
INLVTFPNVADAILANGMFSHYDRPRIAQLCEKAGLYVRALQHYSELPDIKRVIVNTHAI
EPQVVFLSNYIKLVPLTCRTVTKIVFFLLLQSLVEFFGTLSREWALECMKDLLLVNLRGN
LQIIVQVAKEYSEQLGVDQCMKLFEQFKSYEGLYFFLGSFLSSSEDPDIHFKYIEAAAKT
GQIKEVERVTRESNFYDAEKTKNFLMEAKLPDARPLINVCDRFGFVPDLTHYLYTNNMLR
YIEGYVQKVNPGNAPLVVGQLLDDECPEDFIKGLILSVRSLLPVEPLVEECEKRNRLRLL
TQFLEHLVSEGSQDVHVHNALGKIIIDSGNNPEHFLTTNPYYDSRVVGKYCEKRDPTLAV
VAYRRGQCDDELINVTNKNSLFKLQARYVVERMDEDLWGKVLDPENEYRRQLIDQVVSTA
LPESKSPEQVSAAVKAFMTADLPHELIELLEKIVLQNSAFSGNFNLQNLLILTAIKADPS
RVMDYINRLDNFDGPAVGEVAVEAQLYEEAFAIFKKFNLNVQAVNVLLDNIRSIDRAVEF
AFRVEEDAVWSQVAKAQLREGLVSDAIESFIRADDATQFLDVIRASEDADVYHDLVRYLL
MVRQKAREPKVDSELIYAYAKIDRLADIEEFILMPNVANLQNVGDRLYDEALYEAAKIIF
AFISNWAKLAITLVKLKQFQGAVDAARKANSAKTWKEVCFACVDAEEFRLAQICGLNIII
QVDDLEEVSEYYQNRGCFNELISLMESGLGLERAHMGIFTELGVLYARYRPEKLMEHIKL
FANRLNIPKLIRACDEQQHWKELTYLYIQYDEFDNAATTIMNHSPEAWDHMQFKDVAVKV
ANVELYYKAVHFYLQEHPDLINDLLNVLALRVDHTRVVDIMRKAGHLLLVKPYMVAVQSN
NVSAVNEALNAIYVEEEDYERLRESIDLHDSFDQIGLAQKIEKHELLEMRRVAAYIYKKA
GRWKQSIGLSKKDKLYKDAMETASQSGDRELAEELLVYFIEQGKKECFASCLFVCYDLIR
ADVVLELAWMNNMIDFAFPYLLQFIREYTGKVDELVKDKLEAQKEVKAKEQEEKEVIAQQ
NMYAQLLPLALPAPPMPGMGGGFAPPPPMGGMPPMGMPPFGMPPMGSSY
NT seq
5190 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgcgaacgctccgatcaccatgaaggaagccctaacgcttccgagcgttggg
attaatccacaattcataacattcacacatgttactatggaatccgataagtacatatgt
gttcgggagacttcgccgcagaatagtattgttattattgatatgagtatgccgatgcaa
cctctgaggaggccaatcactgcggactctgcacttatgaatccaaattccaaaatcctt
gcattgaaagcccaagtccaaggtactactcaggatcaccttcaaatatttaacattgag
atgaaagcaaaattgaaatcacatcttatgcctgaacagattgttttttggaagtggata
accccaaagatgttgggtttagtcactcagactacagtgtatcactggtcaattgaaggg
gagtcggaacctgtcaaggtgtttgagcgaacagctaatctggcaaacaatcagataata
aattaccgttgtgatccttctgagaagtggttggttttggttggaattgctcctggtgct
ccagagaggccacaattggttaaaggaaatttgcaactcttctctgtggatcagcagcgc
agtcaagctcttgaagcacatgctgcatcatttgctcaatacaaggttccagggaatgag
aatccctcgactcttatttcttttgccactaagaccctgaatgctggacagattacatca
aagttacatgttattgagctcggtgcccagccagggaagccatcttttacgaagaaacaa
gcagatctgttctttcctccagattttgctgatgatttcccagttgccatgcagatgtct
cacaagtacagcttgatttatgtaattacaaagcttgggctactgtttgtgtatgattta
gagacagctagtgcagtttacagaaatagaattagtccggatccaatcttcttgacaaca
gaggcttcatcagttggagggttttatgcggttaataggcggggccaggtgttgttggct
acaattaatgaacaaactattgtgccttttgtcagtggtcagttaaacaatttggagctt
gctgtcaatctggccaaaagaggaaatcttcctggtgccgaaaatcttgttgtccagcgt
ttccaagaactgtttgcccaaactaagtacaaagaagctgctgaacttgctgctgagtcc
ccacaaggaattctccgtacacctgatacagttgctaaatttcagagcgttcctgtccaa
actgggcaaaccccacctctgttgcagtactttgggaccctcttgacacgagggaagctc
aatgcgttcgagtcattggaattatcacgtcttgtagtgaaccagaacaaaaagaatctt
ttggagaactggttggcagaggacaaactcgaatgcagcgaggaactgggagatcttgtg
aagactgtggataatgatcttgctttgaaaatatatattaaagccagagcaactccaaaa
gttgttgcagcttttgccgagcgaagggaatttgacaagatactgatctactcaaagcag
gttggctacacgcctgactatctgttccttttgcaaacaattcttcgagcagatccgcag
ggtgctgttaattttgcattgatgatgtcccaaatggaaggtggttgtccagttgattac
aacaccataactgatctcttccttcagaggaacctgattcgtgaggcgaccgccttttta
ttggatgttctgaagccaaatcttccagaacatgctttcctgcaaaccaaggtccttgag
atcaatttagtgacttttccaaatgtggctgatgctattttagccaatggaatgttcagt
cattatgatcgccctcgaattgcccagctatgtgaaaaagctggtctttatgtgcgagct
ctgcaacattactcagagttgcctgatattaaacgtgttatagtgaatacacatgcaata
gagccacaggttgtattcctctctaactacatcaaattggtaccattaacttgtagaact
gttactaaaattgttttttttcttcttctacagtcacttgtagagtttttcggcactctt
tcacgagaatgggcattggagtgtatgaaagatcttttattggtcaatttaagaggcaac
cttcagataattgtgcaggtcgctaaggaatactctgagcagttgggtgttgatcaatgc
atgaagctttttgaacagttcaagtcatatgaagggttgtacttcttccttgggtcgttt
ctgagctcaagtgaggatcctgatatccacttcaagtacattgaggcagctgctaaaacc
ggacaaatcaaagaggtggagcgagttactagagaatcaaacttctatgacgctgagaaa
acaaagaacttcttaatggaagctaagctcccagatgcacgcccactcattaatgtttgt
gatcgttttggatttgttccagatctgacccactacttgtacacgaacaacatgcttcgt
tacattgaaggttatgttcaaaaggtgaatcctgggaatgctcctttagttgtgggacag
ttgcttgatgatgagtgccctgaagattttatcaagggcttgattctttctgtccgttca
ttgcttcctgtggagccccttgtggaggaatgcgagaagaggaatcgacttcgtttactc
actcagttcttggagcatcttgtgagtgagggaagccaagacgtacatgttcacaatgct
ttgggtaaaatcatcattgatagcggcaataatccagagcacttccttaccacaaaccca
tattatgattcacgtgttgttggtaaatattgtgagaaacgtgaccctacccttgctgtt
gttgcttaccgccgtggacaatgtgatgatgaacttattaatgtcacaaataaaaactct
ttgttcaaattgcaagcaagatatgtggttgagagaatggatgaagatctttggggaaaa
gttcttgaccctgagaatgagtacagaagacaacttattgatcaagttgtttctactgcc
ttgcctgagagcaagagcccagaacaagtttctgcggctgttaaggctttcatgactgct
gatttgccccacgaattaattgaacttcttgaaaagattgtgcttcaaaactctgccttc
agtggcaacttcaatctgcaaaacttgctaattttgacagccatcaaggcagatccgtct
agagttatggattatattaataggctagataattttgatggacctgcagttggggaagta
gctgtggaagcccagctgtatgaggaagcatttgcaattttcaagaagtttaacttgaat
gttcaagctgttaacgtcttgctggataacatcagaagcattgatagggctgtggagttt
gcattccgtgttgaagaagatgccgtttggagccaggttgcaaaggctcaactccgggag
gggctggtgagcgatgcgattgagtcattcattcgtgcggatgatgccacccaattcttg
gatgttattcgtgcttctgaggatgcagatgtctaccatgacttggtgaggtaccttctg
atggttaggcagaaggcgagagagcccaaggtggacagcgagctcatttatgcatatgca
aagattgataggcttgctgacattgaagagtttattcttatgcctaatgttgctaatctc
caaaatgttggtgatcgcctatatgacgaggccctctatgaggctgcaaaaataatattt
gcttttatatctaactgggccaagttggcaataacactagtgaagctcaaacaattccaa
ggtgctgttgatgcagcacgaaaagccaacagtgcaaagacatggaaggaggtttgcttt
gcttgtgttgatgctgaggagttccgcttagctcagatttgtggcctcaacattattata
caggtggatgatttggaagaggtcagtgaatactatcagaatagaggatgcttcaacgag
ctaatatctctaatggagagtggtctagggttagaacgtgctcacatgggaatctttact
gagttgggggttctatatgctagatatcgtccggagaaacttatggagcacatcaaattg
tttgcaaatcgtctaaatattcccaagcttatacgagcttgtgatgagcagcaacattgg
aaggagcttacctatctgtacattcaatatgatgagtttgataatgctgcaactaccatc
atgaatcattcccctgaagcctgggatcacatgcagttcaaagatgtggcagttaaagtt
gctaatgtggagctatattataaggccgtgcacttctacttgcaagagcatccagatctc
attaatgatcttctaaatgtgctcgcacttcgtgtagatcatacacgtgtggttgacatt
atgcggaaggccggtcacctgcttcttgtgaagccatacatggttgcagttcagagcaac
aatgtctctgctgttaatgaggctttgaatgcgatatatgttgaggaggaagattatgaa
agattgcgtgaatcaattgatttgcacgatagctttgaccaaataggccttgctcaaaag
attgagaaacacgagcttctggaaatgagacgtgttgctgcttatatttacaagaaagct
ggaaggtggaagcagtccattggattgtcaaagaaagacaaactttacaaagatgccatg
gagacagcctcacagtctggtgaccgtgaacttgcagaggagttgcttgtttatttcatt
gaacagggaaagaaagaatgctttgcatcatgcctgtttgtctgttatgatttgattagg
gcagatgttgtccttgaacttgcttggatgaacaacatgattgactttgctttcccatat
ctgctacagtttatccgtgaatacactggcaaagttgatgaactagtgaaggacaaactt
gaagctcagaaagaggttaaggctaaagagcaggaagagaaagaagttattgcacagcag
aacatgtatgctcagttgctgcctcttgctttgcctgcaccaccaatgcctggtatggga
ggagggtttgctccaccgccacctatgggaggaatgccaccaatgggcatgccacctttt
ggcatgccaccaatgggcagtagctattga
DBGET
integrated database retrieval system
