Prunus avium (sweet cherry): 110749894
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Entry
110749894 CDS
T05161
Name
(RefSeq) vacuolar protein sorting-associated protein 36-like
KO
K12190
ESCRT-II complex subunit VPS36
Organism
pavi
Prunus avium (sweet cherry)
Pathway
pavi04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
pavi00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
110749894
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pavi04131
]
110749894
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pavi04147
]
110749894
Membrane trafficking [BR:
pavi04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-II complex
110749894
Exosome [BR:
pavi04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
110749894
Exosomal proteins of colorectal cancer cells
110749894
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EAP30
Vps36_ESCRT-II
PH_TFIIH
MKT1_C
Motif
Other DBs
NCBI-GeneID:
110749894
NCBI-ProteinID:
XP_021805789
UniProt:
A0A6P5RRV7
LinkDB
All DBs
Position
Unknown
AA seq
442 aa
AA seq
DB search
MARNCLQAAELTTSGRPVLLPTEIECSLLSTVDLECEDLPNFPHLKSGLLILTTHRLLWL
PESTAASSASAIPLAAITHIFSAKKSIKSMFASPRLRFQLSVSPDGWVLDSGSGSRSVVV
TVVVRGKGDLDAFLNKFWDSWRGRAWEIVHEQAGSDVASGSGSSSGMYTREGAVRMVGVS
GILRKEQEMWESTDKSLQDAFQDLNALMSKAKEMVMLAEKMRQKLLSGSTSQPSAENDEE
LGSKQEMQDWLLSVGIISPVTKESAGAMYHQQLSRQLADFVRLPLERSGGMMNLIDIYCL
FNRARGTELISPEDLLQACSLWEKFDVPVMLRKFDSGVMVIQNKSHSDEEVFARIKTLVT
KPDALRTGISASDAAITLGIAPGMAKEHLLTAESKGLLCRDISPDGFRFYVNLFPEIDPN
DMFSVKDYGIYSTWLRAACASG
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atggccagaaactgcctgcaagcggcggaactaaccaccagcggccgcccagtcctcctt
ccaacggagatcgaatgctcactcctctccactgtagacctcgaatgcgaagacctcccc
aacttccctcacctcaaatcgggtctcctcattctcaccacccaccgcctcttatggctt
cccgagtccaccgccgcctcttcagcctccgccatccctctcgccgccatcacccacatc
ttctccgccaaaaagtcaatcaagtccatgttcgcctcaccccggctccgattccagctc
tcggtctcgcccgacggctgggttttggattcgggttctggttcaaggtccgtggtggtg
acggtcgtggtcagggggaagggcgatttggacgcctttttgaacaagttttgggacagc
tggcggggaagggcctgggagattgtgcatgagcaggccggctcggatgttgcttcgggt
tccgggtcgagctctgggatgtatacgagggaaggggcggtgaggatggttggagtgtca
gggattctaaggaaggagcaggagatgtgggagagtactgataagagcttgcaagacgct
ttccaggacttgaatgctctcatgagtaaggctaaagagatggtgatgctagcagagaaa
atgaggcagaaacttttatctggctcgacttctcagcccagtgcggaaaatgatgaagaa
ttgggttccaaacaagagatgcaagattggttgctgagtgttggtattatatcgcctgtt
accaaggagtctgctggtgctatgtatcaccaacaattgtcccgtcagttagcagatttt
gtcagacttccacttgagagatctgggggaatgatgaatcttatagacatctactgtctc
ttcaatcgtgctcgaggcacagaattgatctcgccagaagatttgctgcaagcatgttct
ctctgggagaagtttgacgtccctgtaatgcttcgaaagtttgatagtggagtcatggtc
atccagaataagtcccatagtgatgaagaggtttttgctagaatcaagacccttgtaaca
aagcccgatgctcttcgaactgggataagtgccagtgatgctgcaatcacattaggtatt
gcaccaggcatggccaaggagcatcttcttactgctgaaagcaaaggtttgctatgcaga
gatataagccccgatggctttcgcttttatgttaacctgtttcctgaaatcgatccaaat
gacatgttctcagtgaaagattatggaatctatagcacttggttaagggcggcctgcgcg
tctggatga
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