Prunus avium (sweet cherry): 110749903
Help
Entry
110749903 CDS
T05161
Name
(RefSeq) sister chromatid cohesion protein SCC2
KO
K06672
cohesin loading factor subunit SCC2
Organism
pavi
Prunus avium (sweet cherry)
Brite
KEGG Orthology (KO) [BR:
pavi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pavi03036
]
110749903
Chromosome and associated proteins [BR:
pavi03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Adherin complex
110749903
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nipped-B_C
Cohesin_HEAT
PHD
PDS5
PHD_2
zf-RING_16
IFRD
zf-PHD-like
COP9_hel_rpt
Motif
Other DBs
NCBI-GeneID:
110749903
NCBI-ProteinID:
XP_021805802
UniProt:
A0A6P5RTB3
LinkDB
All DBs
Position
Unknown
AA seq
1501 aa
AA seq
DB search
MAHNQMPKQLYKEEIIERILEFSRHQIMDVMCAYDPSYRALHRPSQNGSLEVEEDEDPDA
EIGSASKKRRSIKTVKVHKSSFNRVSAAVNNILQKMCTILGLLKDLLLIERLSDGCILQL
VKTSFTTFMVDNIQLLQLKAMGLISGIFYSYTQHRTYVIDELIQLLWKLPFSKRALRAYH
LPDEEQRQIQMITALLIQLVHYSANLPEPLRQESSGNSILELSLDADYPTKGHEAATEAC
CHFWTRVLQRFASAKTQEASELKVMMENLVTDLLTTLNLPEYPASAPILEVLCVLLLQNA
GLKSKDIGARTMAIDLLGTIAARLKRDSALCSKDKFWILQELVSADGDDQTDPKNACSVC
LDGRVEKNFFVCQGCQRMFHADCMGVREYEVPNRSWHCQICLCRKQLLVLQSYCKSQCKD
DGTKDRNRSGRNTEVAFSITKLEVVQQMLLNYLQDAASADDGHLFVRWFYLLLWYKDDPK
SQQKSRYYLARLKSKEIVRDSGTVFSLLTRDSVKKITLALGQKNSFSRGFDKILHLLLAS
LMENSPVIRAKALRAVSIIVEADPQVLGDKRVQSAVEGRFCDSAISVREAALELVGRHIA
SHPDVGLKYFEKVAERIKDTGVSVRKRSIKIIRDMCVSNANFSEFTKACIAIISRIGDDE
SSIQDIVCKTFYEFWFEEPTGSQTQFFGDGSSVPLEVAKKTEQIVEMLRRMPSHQLLVTV
IKRNLALDFFPQSVKAIGINPVSLASVRKRCELMCKCLLERILQVEEMNIQEGERRTLPY
VLALHAFCVVDPTLCAPASDPSQFVVTLQPYLKSQADSRVIAQLVESIIFIIDAVLPLVR
KLPQSVVEELEQDLKNMILRHSFLTVVHACIKCLCAVSKVAGKGAAIVENLIQLFFKRLD
AQAVDNKQQVGRSLFCLGLLIRYGNCLPSNSDKTSDVVSSLSLFKKYLLVEDFVIKVRSL
QALGFVLIARPEYMLEKDIGKILEATFSSSSDVRLKMQALQNIYEYLLDAESQMGTDAAS
NNVIQYSVEGGNAVSVAAGAGDTNICGGIVQLYWDNMLARCLDLNEQVRQSALKIVEVVL
RQGLVHPITCVPYLIALETDPLEGNSKLAHHLLMNMNEKYPAFFESRLGDGLQMSFTFIQ
SITTSSEQENKKVPTKALGNAKGKCDSISLAQARVGVSRIYKLIRANRASRNKFMSSIVR
KFDNTCWTTSVVPFLMYCTEILALLPFTTPDEPLYLVFSINRVIQVRAGALEAKLKALTL
HLLQRGAPHGNGIIEEDPAAQPFQRGTTLVDLNGTIQQEPVFQPVTNYMLTMQWNGVIQR
EPADQSVSNQTTPLGANMHVTGSGSSHGFSKDDEQKIQADCLAAIALQLLLKLKRHLKIV
YSLNDARCQAFSPADPLKPGDVLSRQNIPFDLSETHTTLPTTHQELVKRYQEFKNALRED
TVDYSTYTANIKRKRPAPRKGRKSVGGDDDGDDDDEDWTGGARRLSNSGRRGNYSRSRQR
L
NT seq
4506 nt
NT seq
+upstream
nt +downstream
nt
atggctcataaccagatgccaaaacaactatataaagaagagatcattgaaagaattctg
gagttttccaggcatcagataatggatgttatgtgtgcttatgatccatcatatcgtgct
ttgcataggccaagtcaaaatgggtcccttgaagttgaggaagatgaagaccctgatgct
gaaattggttcagcaagcaagaaacgacgcagtatcaagactgttaaagtgcataaatcg
tcatttaacagggtctctgctgctgtgaataatattcttcagaaaatgtgcaccattctt
ggtttactcaaggatttgttgttaatagaaagattgtcagatggttgcatcttacaacta
gtgaaaacaagctttacaacattcatggtggataatatccagctcttgcaactgaaggca
atgggtttaatcagtgggatattctattcatacactcagcatcggacttatgtgatagat
gaattaattcagctgctttggaagttaccgttctcaaagcgagctttgagagcctatcac
ctacctgatgaagagcaaaggcagattcaaatgatcactgctttgctgattcagttggtt
cactatagtgcaaaccttcctgaaccgttaaggcaggaatcaagtggtaattccatctta
gaactttctctcgatgccgattatccaactaaaggccatgaggcagcaacagaggcgtgt
tgccacttttggactcgtgtacttcagcgttttgctagtgcgaagactcaggaagcttcg
gagttgaaagtaatgatggagaatcttgttactgatctgctgacaacgttgaatttacct
gaatatcccgcttcggctcctattctggaggttctatgtgtcttgttactccagaatgcc
gggctgaaatctaaagacataggtgcacgtaccatggcgattgaccttcttggcacaatt
gctgcgaggttgaagcgtgattctgccctttgcagtaaggacaaattttggatactacag
gagttggttagtgcggatggggatgatcagactgatccaaaaaatgcatgctcagtttgt
ttagatggtagggttgaaaaaaatttctttgtatgtcaaggttgtcagagaatgtttcat
gctgattgcatgggagtaagagaatatgaagttccgaatcgaagttggcactgtcagata
tgcctctgcaggaagcaacttcttgttttacaatcttactgcaagtcacaatgcaaagat
gatgggacaaaagatcgtaatcgttcaggaagaaacactgaagttgctttttcaattaca
aaacttgaggttgtccagcagatgcttttgaattaccttcaagatgccgcatcagctgat
gatgggcatctctttgttcgctggttttatctcttgttgtggtacaaggatgatccaaaa
tcacagcagaagtccaggtactatcttgctagactgaaatcaaaagaaatagtgcgggat
tctgggacagttttttcattattgacaagggattcagtcaagaagattactttagcattg
ggacaaaaaaactctttttccagagggtttgataagattcttcatttgcttctggcaagt
ttaatggagaattcacctgtaattagggccaaggctttacgagcggtcagtataattgta
gaagctgatccgcaggtgctaggagacaaacgcgttcaatcagctgttgaaggaaggttt
tgtgattcagcaatttctgtcagagaagcagcactggaacttgtagggaggcatattgct
tctcatcctgatgttggtttgaagtattttgagaaggttgctgagagaatcaaagatact
ggagtaagtgttcgaaaacgatctatcaaaatcatacgagatatgtgcgtttcaaatgca
aacttctccgaatttacaaaagcttgcattgctatcatctcccgtattggtgacgacgaa
tcaagtatacaggatattgtttgcaagacattttatgagttctggtttgaggaacctact
ggttcacaaactcagttctttggagatggtagctctgttccattggaggtggctaaaaaa
actgaacagattgttgagatgttgaggaggatgccaagtcatcaacttcttgtgactgtc
attaaacgcaacttagcccttgatttttttccccaatcagttaaagctattgggataaac
cctgtctcacttgcatctgtacgcaagcgctgtgagttaatgtgcaagtgcttactggaa
aggatattgcaggtagaggaaatgaatatccaggaaggagagaggcggacgcttccatat
gtgctagctttgcatgcattctgtgttgtggatccaacactttgtgcaccagcttctgac
ccttcccagtttgtggtcactcttcagccttatctaaagagtcaggctgatagtcgagtg
attgcacagttagtggagagcataatctttataattgatgctgttctgcctttggtacga
aagttaccacaaagtgttgttgaagaacttgaacaagacttaaagaacatgattcttcgg
cattccttcttgacagttgttcatgcttgcatcaagtgcctctgtgctgtgagtaaagtg
gcaggaaaaggtgctgctatagtggagaatcttattcagctgttcttcaaacgtttggat
gctcaggcagtagataacaagcagcaagtggggcggtctcttttctgtcttggattgctt
atccgttatggcaactgtttgccaagtaactctgacaaaacaagtgatgttgtaagcagt
ctcagcttgtttaaaaaatatcttctagtggaagattttgtcataaaggttcggtcatta
caggcattgggctttgttctaatagctcggcctgaatatatgttggaaaaagatatcggg
aaaatattagaggcaacattctcttctagctctgatgttcgtcttaagatgcaagcattg
caaaacatatatgaatatctccttgatgctgaaagtcaaatgggaacggatgcagccagt
aataatgtgattcaatattctgtggaaggtggcaatgctgtatctgttgctgcaggtgct
ggggatactaatatctgtggtggaatagttcagttgtattgggataatatgttagcgaga
tgtttggaccttaatgaacaagttcgccaatctgcacttaagattgttgaagttgtgctg
cggcaaggccttgtgcatcctattacttgtgttccataccttattgcactcgaaacagat
cctctggagggcaattcgaaattagctcatcatttgctgatgaatatgaatgaaaagtac
ccagcattttttgaaagccgcctgggggatggccttcaaatgtcgttcactttcatacag
tccattactaccagttctgaacaggagaacaaaaaagttccaacaaaggctttgggaaat
gcaaagggaaaatgtgatagtatttctcttgctcaagcaagagtaggggtttctcgaatc
tataagcttattcgtgctaaccgggcttcgaggaacaaatttatgtcttcgattgttcgc
aagtttgataatacttgctggacaacttcagtcgtcccgttcctaatgtactgcacagaa
atacttgcgttgctaccgttcacaacacctgatgagccgctttatttggtcttttctata
aatagagtaatacaagttagggctggagcgcttgaagcaaaactgaaagctctaaccttg
catctgttacaaagaggtgcgcctcatgggaatggcataattgaagaggacccagctgct
cagccttttcaaagagggacgacattagtggatttgaatgggacaattcaacaagaacca
gtgtttcaacccgttacaaattatatgctaacaatgcagtggaatggggtaatacaacga
gagccagctgatcagtctgtctcaaatcaaactacccctttgggggcaaacatgcacgtt
acgggatctggcagttcccatggcttctcaaaagatgatgaacagaagatccaggcggac
tgcctggcagctattgcattgcagcttcttttgaaactaaagagacacctaaagattgtg
tatagcctgaatgatgcaaggtgccaggccttttctccagctgatccccttaaaccggga
gatgttctctccaggcagaacattccttttgacctcagtgaaacacacaccaccttgcct
acaacacatcaagaattggtaaaaagatatcaggaattcaagaatgcgttgagggaagat
actgttgattactctacttacacagccaacatcaagagaaaacgtccggcccccagaaaa
ggacggaaatctgtaggtggagatgatgacggtgatgatgatgatgaagattggacaggt
ggggctcggaggctgagtaatagtgggaggagaggtaactacagtagaagtcgacagcgg
ttatag
DBGET
integrated database retrieval system
