Prunus avium (sweet cherry): 110750517
Help
Entry
110750517 CDS
T05161
Name
(RefSeq) replication factor C subunit 2
KO
K10755
replication factor C subunit 2/4
Organism
pavi
Prunus avium (sweet cherry)
Pathway
pavi03030
DNA replication
pavi03410
Base excision repair
pavi03420
Nucleotide excision repair
pavi03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pavi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
110750517
03410 Base excision repair
110750517
03420 Nucleotide excision repair
110750517
03430 Mismatch repair
110750517
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pavi03032
]
110750517
03036 Chromosome and associated proteins [BR:
pavi03036
]
110750517
03400 DNA repair and recombination proteins [BR:
pavi03400
]
110750517
DNA replication proteins [BR:
pavi03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
110750517
DNA Replication Termination Factors
ELG1-RFC complex
110750517
Chromosome and associated proteins [BR:
pavi03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
110750517
DNA repair and recombination proteins [BR:
pavi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
110750517
Check point factors
HRAD17(Rad24)-RFC complex
110750517
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
RCF1-5-like_lid
AAA_22
Rad17
RuvB_N
AAA_11
AAA_16
Mg_chelatase
AAA_assoc_2
DUF3802
AAA_5
AAA_14
nSTAND3
SLFN-g3_helicase
AAA_24
ResIII
PhoH
AAA_2
AAA_30
Gp44_lid
AAA_28
AAA_19
AAA_7
AAA_25
DUF815
NPHP3_N
RNA_helicase
Ribophorin_II
Parvo_NS1
Cdc6_lid
bpMoxR
IstB_IS21
TIP49
AAA_18
DUF3853
NB-ARC
ATPase_2
Motif
Other DBs
NCBI-GeneID:
110750517
NCBI-ProteinID:
XP_021806545
UniProt:
A0A6P5RNR8
LinkDB
All DBs
Position
Unknown
AA seq
339 aa
AA seq
DB search
MAPLVQSSQPWVEKYRPKQVKDVAQQDEVVRVLTNTLETSNCPHMLFYGPPGTGKTTTAL
AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGSAQRQGGYPCPPFKIII
LDEADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEIMI
SRVLHICQEEGLNLDPEVLSTLSSISQGDLRRAITYLQSAARLFGSSISKIELISVSGVI
PEEVVKSFFAACRGDNFDLANKEVNNVIAEGYPVSQMLSQLFEVVVESDDISDEQKARIC
KKMGEADKRLVDGADEYLQLLDVASSVMRAMCNMPEDFS
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atggcgccactggtgcaaagctcgcaaccatgggtcgaaaaatatcggccaaagcaagtg
aaagatgtggctcagcaggacgaggtggttcgggtcctcaccaacaccctcgagacctca
aattgtccgcacatgctgttctacggtccaccaggcaccggaaaaaccaccactgctctc
gccattgcccaccagcttttcggacctgaactctacaagtctagagtgttggagctcaat
gcaagtgatgatcgtgggatcaatgttgttcggacaaagatcaaagattttgctgctgtg
gctgtgggttctgctcaacgtcaagggggttacccttgtccaccatttaagatcattatc
ctagatgaggcggattcaatgacagaagatgctcagaatgctctaagacgtacaatggaa
acgtactccaaagtcacaagattcttttttatatgtaattatatcagcaggatcattgag
ccacttgcttcgagatgtgcaaagtttaggtttaagccactttcagaagaaatcatgatc
agccgtgtattgcatatttgccaagaagaaggcctcaacctagatccggaggttctgtca
actctaagttctatctcacaaggtgatcttcgtcgggctattacatacttgcagtcagct
gcgcgcttatttggatcttccatttctaagatagagctgattagtgtctctggggtaatc
ccggaggaggttgtcaagtcattttttgctgcctgcaggggtgataactttgatttggca
aacaaggaagtcaacaatgtaatcgcagagggatatccagtctctcagatgctttcacag
ttatttgaggtggtggttgaatcagatgacatatcagatgaacagaaggctagaatatgc
aaaaaaatgggtgaagcagataagcgtcttgttgacggtgctgatgagtacctgcagctg
cttgatgttgccagcagtgtaatgcgagctatgtgtaacatgcccgaagatttctcatag
DBGET
integrated database retrieval system