Prunus avium (sweet cherry): 110750579
Help
Entry
110750579 CDS
T05161
Name
(RefSeq) SWI/SNF complex subunit SWI3C isoform X1
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
pavi
Prunus avium (sweet cherry)
Pathway
pavi03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
pavi00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
110750579
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pavi03021
]
110750579
03036 Chromosome and associated proteins [BR:
pavi03036
]
110750579
Transcription machinery [BR:
pavi03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
110750579
Chromosome and associated proteins [BR:
pavi03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
110750579
PBAF complex
110750579
GBAF(ncBAF) complex
110750579
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIRM-assoc_1
SWIRM
Myb_DNA-binding
Myb_DNA-bind_6
SANT_DAMP1_like
Motif
Other DBs
NCBI-GeneID:
110750579
NCBI-ProteinID:
XP_021806615
UniProt:
A0A6P5RNZ0
LinkDB
All DBs
Position
Unknown
AA seq
802 aa
AA seq
DB search
MPASPSFPSDSRGKWRKRKRDPQIRKGKRDDDDDDDDDAVAAAEDNDLEQNDDVSEDPHH
NPQSGAAPDPGPHETEVLDGGVRQSDFPPVVLRTVNRPHSSVLAIVALEQANHSGGDAKG
PTSPIVLENVSYGQLQALSAVPADSPALDPDRADGAGSSYVVTPPSIMEGRGVVKRFGNR
VHVVPMHAADWFSPATVHRLERQVVPHFFSGKSSDHTPEIYMQCRNEIVAKYMENPEKRL
AFSDCSRLALAGRLSSDDLTRIIRFLDHWGIINYCAVAPSREPWSGSSYLREELNGEIHV
PSAALKSIDSLIKFDKPRCRLKAADVYSSLPCHDDDDVSDLDNTIRKRLSENHCNHCSCS
LPDVYYQSQKEVDVLMCSNCFHEGRFVVGHSSIDFIRVDSTKDYGDTDGENWTDQETLLL
LEAMETYNENWNEIADHVGTKSKAQCILHFLRLPVEDGLLENIEVPGVPMSSNSSDRDGR
GGFHSNSNGDTAGSCPQDADSESRFPFANSGNPVMSLVAFLASSVGPRVAASCAHAALTV
FSEDNGVSASGSILQMEGSGHRMNPESIHGREGGAHGNIANSLQQKEENTAGHGSRGQNE
AGTIPIPAEKVIAAAKAGLAAAAVKAKLFADHEEREIQRLSANIINHQLKRLELKLKQFA
EVETFLMKECEQVEKTRQRMAGERARLMSARFGPAGVAAPMGLAGLGPSMSNNNTGTGRQ
QIMSPSASQPSVSGYSNNQPIHPHMPFVPRQSMLGLGPRMPLTSIQSSSSAPNAMFNAAG
TAQPTLNHPMLRPVPGTSSGLG
NT seq
2409 nt
NT seq
+upstream
nt +downstream
nt
atgccagcttctccttcattcccttcagactcccgcggcaaatggaggaagcgaaagcgc
gacccccaaattcgcaaaggcaaacgcgacgacgacgacgacgacgacgacgacgcggtt
gctgccgcagaagacaacgacctcgaacagaacgatgacgtttcagaggatccccaccat
aacccccaatccggtgccgcaccggatcccggccctcacgagaccgaggtcctcgacggt
ggggtccgccaaagcgacttccctcccgtcgttttgcgcaccgtgaacagaccccactcg
tccgttctggcaattgtggcgctcgagcaagccaatcacagcggcggggacgccaagggc
cccaccagcccgattgtcttagagaatgtgtcgtatggtcagctccaggcgttgtcagct
gtgcccgccgatagtccggcgttggatccggaccgtgcagatggtgccgggtcgtcttac
gtggtcactccgccttcgattatggaaggccggggcgttgttaagcggtttgggaacaga
gttcatgtggttccaatgcacgcagcagattggttttcaccagccacagtgcatcgacta
gagagacaagtggtgccgcattttttctcaggaaaatcgtcagatcatactcctgagata
tacatgcaatgtaggaatgaaattgttgctaaatacatggaaaatccagagaagagactt
gcattttctgattgcagtagattagcattagcaggccgtctaagttctgatgatttgact
cgaataattcgttttcttgatcactggggaattatcaattactgtgctgtagcaccgagt
cgagagccttggagtggcagttcctacttaagggaggagctaaatggtgaaattcatgtg
ccatcagctgctctaaaatccattgatagtttaatcaaatttgacaagcccagatgtagg
cttaaggcagctgatgtttattcgtctttgccatgtcatgatgatgatgatgtctctgat
ttggacaacacaattcggaaacgtctatctgaaaatcattgcaatcattgttcttgttct
cttcccgatgtatactatcagtcacagaaggaggttgatgtacttatgtgctctaattgc
ttccatgagggaagatttgtggttggtcattcaagcatagatttcatacgggtggattca
acaaaagattatggtgatacagatggggagaattggactgatcaagaaacccttctgctg
cttgaggcaatggaaacgtacaatgagaactggaatgaaattgcagaccatgttggtacg
aagtcaaaagcacaatgcatccttcattttcttcgtttgcctgtggaggatggcctgctg
gaaaatattgaagttccaggcgtgcccatgtcttccaactcgtcagatagagatggtcgt
ggaggatttcattcaaactcaaatggggatacggcaggatcctgcccacaagatgctgat
tctgaaagcaggttcccatttgcgaattctgggaatccagtcatgtccctggttgcattt
ctggcctcttctgttgggccaagagttgctgcatcttgtgcccatgcagcattgacggta
ttttctgaggataatggtgtatctgcttctggaagtattttgcagatggaaggatcagga
cataggatgaaccctgagagcatacatggtagagaaggtggtgctcacggaaatattgca
aattcacttcagcagaaggaagagaacacagcaggacatggttctaggggtcaaaatgag
gcagggacaattccaatacctgcagaaaaagttatagctgctgccaaagctggccttgct
gctgccgcagtaaaggcaaaattatttgctgatcatgaagaacgggaaattcagagacta
tctgctaatatcataaatcatcagttgaagagattggagctgaagttaaagcagtttgca
gaagtggaaacttttctaatgaaagaatgcgaacaagtggagaagactaggcagaggatg
gctggtgaacgtgcccgtcttatgtcagctcggtttggacccgctggagtagctgcacct
atgggtttagcaggtcttggtccttccatgtccaataataacactggtaccggtaggcaa
caaataatgtcaccttcagcttcacagcctagtgtatcaggatacagcaacaaccaacca
atccatccccacatgccatttgtgccacgccaatcaatgttagggttgggtccgaggatg
cccttgacatccatacagtcatcctcatcagctccaaatgccatgtttaatgccgcaggg
actgcccagccgactttaaatcatccaatgttgaggcctgtaccaggtactagctctggt
ctaggttga
DBGET
integrated database retrieval system
