Prunus avium (sweet cherry): 110750680
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Entry
110750680 CDS
T05161
Name
(RefSeq) polypyrimidine tract-binding protein homolog 3 isoform X1
KO
K14948
polypyrimidine tract-binding protein 2
Organism
pavi
Prunus avium (sweet cherry)
Brite
KEGG Orthology (KO) [BR:
pavi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pavi03041
]
110750680
Spliceosome [BR:
pavi03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
110750680
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_5
RRM_1
RRM_8
RRM_occluded
RRM_PARP14_3
Nup35_RRM_2
TGF_beta
Motif
Other DBs
NCBI-GeneID:
110750680
NCBI-ProteinID:
XP_021806729
UniProt:
A0A6P5RUG3
LinkDB
All DBs
Position
Unknown
AA seq
492 aa
AA seq
DB search
MFVLCCAYWNLIVCTSQITCQALDPCSPPDLSSLLLRSPSLSLSGFSTMTEPSKVIHVRN
VGHEISENDLLQLFQPFGVITKLVMLRAKNQALIQMQDTPAAVSALQFYGNVQPAIRGRN
VYVQFSSHQELTTMYQNAQGRGDEPNRILLVTIHHMLYPITVEVLHQVFFPHGFVEKIVT
FQKSAGFQALIQYQSRQSAVAARTALQGRNIYDGCCQLDIQFSNLDELQVNYNNERSRDF
TNPNLPSEQKGRSPQPGYGDAGGVYGLQGTGARAVGFPQMANAAAIAAAFGGGLPPGISG
TNDRCTVLVSNLNPDKIDEDKLFNLFSIYGNIVRIKLLRNKPDHALVQMGDGFQSELAVH
FLKGAILFGKRLEVNFSKHPNITQGADTHEYMNSNLNRFNRNAAKNYRYCCSPTKMIHLS
SLPQEVTEEEIVNHLEEIGTIVNTKLFEMNGKKQALVLFETEEQATEALVCKHATSLGGS
IIRISFSQLQGI
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgtttgtactttgctgtgcgtattggaatctaatcgtctgtacatcgcaaattacatgt
caagcactcgatccctgcagtcctcctgacttgagttcactccttcttcgatccccctct
ctctctctctcagggttttccacgatgacagaaccttctaaagtcattcatgttcgaaat
gtggggcatgaaatttctgaaaatgatttgcttcagctatttcagccatttggagtcata
actaagcttgtgatgcttcgtgcaaaaaatcaggctcttatccaaatgcaagatactcct
gctgcagtaagtgcactgcaattctatggaaatgttcaacctgcaataaggggaaggaat
gtctatgtccagttctcatcacatcaagaactgacgacaatgtatcagaatgctcaagga
cgaggagatgagccaaaccgaattctcttagttacaattcatcacatgctatatcctata
acagtggaagttctgcatcaagtgttttttcctcatggatttgtagagaagatcgtcact
tttcagaagtcagctggttttcaggccctaatccagtatcagtcacgccagagtgccgtt
gcagctagaactgcactgcagggacgcaatatttatgatggttgctgtcaattggacatt
cagttctcaaaccttgacgagttacaagtgaactacaataatgagcgttcaagagatttc
acaaaccccaatttgccttcagaacagaaaggaagatccccgcagcctgggtatggtgat
gcaggaggcgtgtatggccttcaaggtactggagccagggcagttggatttccgcagatg
gctaatgcggctgcaattgcggccgcctttggtggaggtttacctcctggtataagtggg
acaaatgacaggtgtacagtccttgtctcaaatctcaatcctgataaaatagacgaggat
aagctttttaacttgttttccatatatggaaacattgtgagaattaaacttcttcgaaac
aaaccagaccatgcacttgtccagatgggtgatggcttccagtccgaactggcagtacac
tttctaaagggtgcaatcctgtttgggaagcgattggaggtcaacttctcaaagcatccg
aatataacccaaggtgccgacacacatgaatacatgaactcaaatctcaaccgcttcaat
cgtaatgcagcaaagaactaccgctattgctgttcaccaacaaagatgatccacttgtct
tctcttccccaggaagtcactgaagaggagattgtgaaccacctagaggaaattggtacc
attgtaaacacgaagctctttgagatgaacggaaagaagcaggcgttggttctgtttgaa
actgaggagcaggccactgaagctcttgtgtgcaagcatgctacctcgctcggtgggtca
ataatccgaatctccttttcgcagctacagggaatatga
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