Prunus avium (sweet cherry): 110750829
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Entry
110750829 CDS
T05161
Name
(RefSeq) protein transport protein SEC16B homolog
KO
K20353
COPII coat assembly protein SEC16
Organism
pavi
Prunus avium (sweet cherry)
Brite
KEGG Orthology (KO) [BR:
pavi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pavi04131
]
110750829
Membrane trafficking [BR:
pavi04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
110750829
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_Sec16
Sec16
TctA
Motif
Other DBs
NCBI-GeneID:
110750829
NCBI-ProteinID:
XP_021806895
UniProt:
A0A6P5RPU1
LinkDB
All DBs
Position
Unknown
AA seq
1430 aa
AA seq
DB search
MATTSFELEDQTDEDFFDRLVNDDIDFTGNVPSSVQNSEPDEVKAFSKLSISEAGSLGVD
ISGYGGFGVNGELGHEDRVVLESLDPLQDPVEVVKEIKSPTPDSKNEFIALNDIADNGNE
ARALEDKADDRNEASALDDKAGNGNEAKALEHKGEEGVVDGAGSTSILSAETGVKVVQWS
SFNSDLKPSAGNSDFFSEFGDYSEDPFANLGNTEKYWAESMVTSGVLENSVADLGASSYA
QNQEGQPCGAIEEQNLDGEDLNSSQNWENLYPGWRLDPNTGQWYQLEGYDVSANTNTDVN
INANAQESFNVNSHSVDNVVFSDQKEDAYYFQQPAQSVSQSVAQGSETSTGSNWNEHSRG
NTDYPAHMVFDPQYPGWYYDTIAQEWKQLESSAPASDQSSSVEHNQQYHNTNVENHGSQS
LLNEQDVANWGGSMSTYDQQSASMWHTQNVAKSDTISFPEKQQYATQYFSAEHVTNSVNQ
QTGFNPSGSIALNEEVSHGYGISGGVGGFESFHPAGNFSQHQNQAKEPNQVMSFSPANFD
CQKPVHFSQQPVQSGSQFSHEASMGRSSAGRPPHALVTFGFGGKLIVMKDNSYSPANMTY
QSQDSVGGVINVLNLMEVVVDKTDAASFGTGCHDYFHALCQQSFPGPLVGGNAGSRELNK
WIDDKIANCETTCMDFRKGEHLRLLFSLLKIACQYYGKLRSPFGTDLALKETDSPESAVA
KLFYSAKKSNEHGAVMCCLHNLPSEAQSQATALEVQKLLVSGRKKEALQCAQEGQLWGPA
LVIASQLGDQFYGDTVKYMALNQLVAGSPLRTLCLLIARQPADVFSNATTDSNLPMNISQ
QHTQIGANYMLDGWEENLAILTANRTTDDELVIIHLGDCLWKERGQNTAAHICYLVAEAN
FEQYSDSARLCLLGADHWKFPRTYASPEAIQRTELYEYSRVLGNSQFLLLPFQPYKLIYA
HMLAEVGKVGDALKYCQAILKSLKYGRAPELDTWRQLVSSLEERIRAHQQGGYNTNLAPA
KLMGKLFTLFDSTAHRVVGGLPPPVPATSQGHAHQPEGPSVSNNQSTMGMSSLMPSASME
PISEWTAESNQLNIPNRSISEPDFGRSPGKVDASKKVDSSKTQEKASTSRFGNFGSQIFQ
KTLGFVKRSQSDRQAKLGEKNKFYYDEKLKRWVEEGAEPPAEEAALPPPPPTAAFPNRMQ
DYNINDALNTKSFDAVAGPQIKSPVPPEQSSGIPPIPPSSNQFSARGRTGVRSRYVDTFN
KGGGTPGNLFQSPSLPSAKPGVGPNPKMFIPTAVTSYEKTVQTPGESAQEPLVTIKNPPK
SFQDVFPTPQTSTSSSMTTMQRFPSMDNIVQKRAGEMANGSSFVPPESRRVASWSGSLNH
ASNPSMRNEIKPLGEALGRSPLSHMRSGPPSLQSSRSGGSFGDDLHEVEL
NT seq
4293 nt
NT seq
+upstream
nt +downstream
nt
atggccaccacttcgtttgagttggaggatcagacagacgaggatttctttgacagattg
gttaatgatgacattgattttactggaaatgtgcctagttctgtacaaaacagtgaacct
gacgaggtcaaagctttttcaaaattgagtatttcagaagccggttctctaggagtagac
atcagcggctatggtggttttggggttaatggtgaattgggtcatgaagatagggttgtg
ttggaatcgttggatccacttcaggaccctgtagaagttgttaaagaaatcaagtcaccg
acacctgattctaaaaatgagttcattgcattgaatgatatagccgataatggaaatgag
gctagggcattggaggataaagcagatgatagaaatgaggctagtgcattggatgataaa
gccggtaatggaaatgaggctaaggcactggagcataaaggggaggaaggtgtggtagat
ggggcagggagtactagtattttatcagcggaaactggtgtgaaagtagttcaatggagt
tcgtttaactcggatttgaaaccttctgctgggaactcggattttttcagtgaatttgga
gattactcggaagacccatttgcaaatttgggtaatacagaaaaatattgggctgagtct
atggtcactagtggtgttttggagaactcagttgctgatttaggtgcttctagttacgcg
cagaatcaagaaggtcagccttgtggggctattgaggaacaaaatttagatggggaggac
ttgaatagtagtcagaattgggaaaatctttacccgggatggaggttggatccaaatact
gggcaatggtatcagttggagggttacgatgtgagtgccaatacaaatacagatgtgaac
attaatgcaaatgctcaagagagttttaatgtgaattctcattctgtagataatgtggtt
ttttcagaccagaaagaagatgcttattatttccagcaaccagcgcagtctgtttctcag
agtgtggcccagggaagtgaaactagcactggttctaactggaatgagcattctcgcggg
aacacagattaccctgcacatatggtttttgatccccagtaccccgggtggtactatgat
acaattgcccaagaatggaagcagttggagtcttctgctccagcttctgatcagtcatca
agtgtggagcataatcagcaatatcacaataccaatgttgagaatcatgggtcacagagt
ctgctcaatgaacaagatgttgcaaactggggtggatctatgagcacctacgatcagcaa
agtgcgagtatgtggcatactcagaatgttgccaagagcgacactattagttttcctgag
aaacagcagtatgcaacccagtatttttcagccgagcatgtaactaattctgtgaatcaa
caaacaggattcaatccttctggatcaattgctcttaatgaagaggtaagtcatggctat
ggtatcagtggtggggttggtgggtttgaaagctttcatcctgcaggaaacttttctcag
catcagaatcaagccaaggagccaaaccaagtgatgagtttctcacctgctaactttgat
tgtcagaagccagtacatttttcacagcagccagtccagagtggaagtcagttttctcat
gaggccagtatggggaggtcatctgcaggacgacctccacatgctctagttacttttgga
tttggtgggaaacttatagtcatgaaagataatagttattctcctgcaaacatgacatat
caaagccaggactctgtaggaggtgtgattaatgttctcaatctgatggaagttgttgta
gacaaaactgatgctgctagctttggaactggttgtcatgattatttccatgcattgtgc
caacaatcttttcctggccccttggttgggggcaatgctggaagtagggaattaaacaaa
tggatagatgacaagattgcaaactgtgaaactacttgcatggatttcagaaagggggag
catttgaggttgcttttctctttactaaaaatagcatgccaatattatggaaaacttcga
tctccctttggcactgacctggcattgaaggaaactgatagtccagagtcagctgttgct
aagcttttttactctgctaagaaaagtaacgagcatggtgctgttatgtgctgcttacat
aacttgccttctgaagcacagagtcaagctactgctcttgaggtacagaagcttcttgtc
tctggtaggaagaaagaggctttacaatgtgcacaggaaggtcagttgtggggtccagca
ctggtcattgcatcgcagcttggtgatcagttttatggtgatactgtgaagtatatggct
ctaaaccagttagtagcaggatcaccattgaggacgttgtgcttgttaattgccaggcag
cctgcagacgtgttttccaatgccactacagatagcaatctacctatgaatatatcacaa
caacatacacagattggggccaattacatgttagacggatgggaagagaatttagccatc
ttaactgcaaacagaacaacagatgatgagcttgttatcatccatcttggagattgccta
tggaaggaaaggggccagaacactgctgcacacatatgttatttggttgcagaagcaaac
tttgagcaatattcagacagtgcaagactgtgtcttcttggtgcggatcattggaaattt
ccacgaacatatgccagtcctgaggctatccagaggacagaattgtacgaatactcaagg
gttcttggaaattctcagtttctcctacttccttttcagccatataagcttatttatgcc
cacatgctggctgaagttggaaaagttggagatgctctgaaatactgtcaagcaatttta
aagtctttaaaatatggtcgagcacctgaattggacacatggagacagttagtgtcatct
ctggaagagcggataagagcccaccaacagggtggttacaatacaaatttggccccagcc
aaactgatgggaaaattgtttacattatttgatagtactgctcatcgtgtggtcggaggc
ctgcctccacctgtacctgcaacatcacaaggccatgctcatcaaccagaaggcccaagt
gtatccaacaatcaatcaacaatgggtatgtcttcattaatgccttcagcatcaatggag
ccaataagtgaatggactgctgagagcaatcaactgaatatccccaatagaagcatttcg
gagccagattttgggagaagcccgggaaaggttgatgcatccaagaaagtggactcttct
aaaacacaagaaaaggcatcaacatctcgttttggtaattttggctcacagatattccaa
aagactctgggatttgtcaaaagatcccagtcagatcggcaggctaaattgggtgaaaag
aataaattctactacgatgagaaacttaagcgatgggttgaagaaggtgctgaacctcca
gccgaggaagcagccttaccacctccaccaccaactgcagccttcccgaatagaatgcaa
gattacaacataaatgacgcactgaacaccaaaagtttcgatgcagttgctgggccacaa
atcaaaagcccggtgccccctgagcagagttcaggaataccacccatcccacccagttca
aaccaattctctgcacgtggacgtacaggtgttcgctcaaggtatgttgatacattcaac
aaaggtggtgggaccccaggaaacttatttcagtcaccatctcttccatctgctaaacct
ggggttggtcccaatcccaagatgttcatccccactgctgtaacttcttatgagaagaca
gttcaaacacctggagaaagcgcgcaagagccattggtgaccatcaaaaatcccccaaaa
tcatttcaggatgtattccctactccacaaacatcaacatcatcttcaatgaccactatg
caacggtttcctagcatggacaacattgtacaaaagagagcaggagaaatggcaaatggc
agtagctttgttccccctgaatcgcgccgtgtagcatcatggagtggaagccttaatcat
gctagcaatccttctatgaggaatgaaataaagcctctaggagaagcacttggtaggtct
ccattgtcgcatatgcgtagtggtccgccatcattgcagtcttcaagaagtggtggtagt
tttggagacgaccttcatgaagttgaactttga
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