Prunus avium (sweet cherry): 110750914
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Entry
110750914 CDS
T05161
Name
(RefSeq) chaperonin CPN60-2, mitochondrial
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
pavi
Prunus avium (sweet cherry)
Pathway
pavi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pavi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
110750914
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pavi03019
]
110750914
03110 Chaperones and folding catalysts [BR:
pavi03110
]
110750914
03029 Mitochondrial biogenesis [BR:
pavi03029
]
110750914
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pavi04147
]
110750914
Enzymes [BR:
pavi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
110750914
Messenger RNA biogenesis [BR:
pavi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
110750914
Chaperones and folding catalysts [BR:
pavi03110
]
Heat shock proteins
HSP60 / Chaperonin
110750914
Mitochondrial biogenesis [BR:
pavi03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
110750914
Exosome [BR:
pavi04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
110750914
Exosomal proteins of other body fluids (saliva and urine)
110750914
Exosomal proteins of breast cancer cells
110750914
Exosomal proteins of colorectal cancer cells
110750914
Exosomal proteins of bladder cancer cells
110750914
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-GeneID:
110750914
NCBI-ProteinID:
XP_021806999
UniProt:
A0A6P5RV76
LinkDB
All DBs
Position
Unknown
AA seq
574 aa
AA seq
DB search
MYRFASSLASKARVARNCSKQIGGTLSWSRNYAAKDIKFGVEARALMLNGVEDLADAVKV
TMGPKGRHVVIEQSFGAPKVTKDGVTVAKSIEFKDKIKNVGASLVKQVANATNDVAGDGT
TCATILTRAIYTEGCKSVAAGMNAMDLRRGITMAVDSVVTNLKSRARMISTSEEIAQVGT
ISANGEREIGELIAKAMEKVGKEGVITISDGKTLDNELEVVEGMKLDRGYISPYFITNQK
NQKCELENPLIVIHEKKISSINAVVKILELALQKQRPLLIVAEDVESEALATLILNKLRA
GIKVCAIKAPGFGENRKSSLQDLAALTGGSLITEELGLNLDKVELDMLGTCKKVTISKDD
TVILDGAGDKKAIDERSEQIRSAIELSTSDYDKEKLQERLAKLSGGVAVLKIGGASETEV
GEKKDRVTDALNATKAAVEEGILPGGGVALLYASKELEKLPTANFDQKIGVQIIQNALKA
PVHTIASNAGVEGAVVVGKLLEQDNPDLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDAA
SVSSLLTTTEAVVVELPSDKETPAMGGGMGGMDY
NT seq
1725 nt
NT seq
+upstream
nt +downstream
nt
atgtatcgttttgcttcaagcctcgcatccaaagctcgagttgctaggaactgctccaag
cagattggtggtacgttgagttggagtagaaattatgcagccaaagacataaaatttggg
gtggaggcccgagccctcatgctcaatggtgtcgaagatcttgccgatgctgtcaaagtc
accatgggccctaaggggcgtcatgtggttattgaacaaagctttggtgcacccaaagta
acaaaagatggtgtaactgttgcaaaaagtatagagttcaaggataaaatcaagaatgtt
ggtgctagcctggtgaaacaggttgctaatgccaccaatgatgtagcgggtgacggcact
acttgtgctacaatcctgaccagagccatttacaccgaaggatgcaagtcagttgctgcg
gggatgaatgcaatggacttgcgacgcggtattactatggcagttgattctgtggtaaca
aacttgaagagcagagcaagaatgatcagcacttctgaagagatagcacaggttggaaca
atatctgcaaatggagagagagaaattggtgagttgattgcaaaggccatggagaaggtt
ggcaaagagggtgtaatcacaatctcggatgggaaaacattggacaatgagttggaggtt
gttgagggaatgaagctagacaggggctacatatccccttatttcatcaccaaccagaaa
aatcagaaatgtgaattggaaaatcctctaattgtgatccatgagaagaaaatctcaagt
attaatgctgtggtgaaaatattggagttggctttgcagaagcaaaggcctttgctgatt
gtcgccgaagatgtggagagcgaagcactggcaacccttattctaaataagcttcgtgct
ggaatcaaggtctgtgcaatcaaagcccctggttttggtgaaaataggaaatccagtctg
caggatcttgccgccctcactgggggttctcttattaccgaggagcttggtctgaatctt
gacaaagtggaattggatatgctcggcacttgcaaaaaggtcacaatttcaaaagatgac
actgtaattcttgatggtgctggtgacaagaaggctattgatgaaagatctgaacagatt
agatcggccattgaattaagtacttccgattatgacaaggaaaagttacaggagagactg
gcaaagctttctggtggtgttgctgttttgaagattggaggagctagcgaaactgaagtt
ggtgagaagaaggatagagttactgatgccttaaatgccaccaaggcagccgttgaagag
ggtatactaccaggtggtggcgttgctcttctttatgcatcgaaagagttggaaaaactc
ccgactgctaactttgaccagaagattggagttcagattattcagaatgctctgaaggca
cctgtccatacaattgcttctaatgctggagtggagggagctgttgttgtcggtaagcta
ttggagcaagataaccctgatcttggctacgatgcagctaaaggtgaatatgttgatatg
gtcaagtccggaataatagatccattgaaagtaattagaactgctttagtcgatgctgca
agcgtgtcgtctttgctgacaactactgaagctgttgtagttgaacttcccagtgataag
gagactccagcaatgggtggtggcatgggtggaatggattattga
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