Prunus avium (sweet cherry): 110751078
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Entry
110751078 CDS
T05161
Name
(RefSeq) WD-40 repeat-containing protein MSI4
KO
K10752
histone-binding protein RBBP4
Organism
pavi
Prunus avium (sweet cherry)
Pathway
pavi03082
ATP-dependent chromatin remodeling
pavi03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
pavi00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
110751078
03083 Polycomb repressive complex
110751078
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pavi03036
]
110751078
Chromosome and associated proteins [BR:
pavi03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
110751078
Histone modification proteins
HAT complexes
HATB complex
110751078
HDAC complexes
Sin3A-HDAC complex
110751078
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
110751078
PRC2.2
110751078
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
110751078
Heterochromatin formation proteins
Other heterochromatin formation proteins
110751078
Chromatin remodeling factors
NuRD complex
110751078
NuRF complex
110751078
NuRF complex (fruit fly)
110751078
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
CAF1C_H4-bd
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_TEP1_2nd
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
WD40_WDHD1_1st
Beta-prop_RIG_2nd
Beta-prop_EML
WDR55
Beta-prop_DCAF12
Beta-prop_IFT122_1st
NBCH_WD40
Beta-prop_WDR35_TULP_N
Beta-prop_WDR90_POC16_2nd
eIF2A
WD40_RFWD3
Beta-prop_SPT8
ANAPC4_WD40
Motif
Other DBs
NCBI-GeneID:
110751078
NCBI-ProteinID:
XP_021807190
UniProt:
A0A6P5RQQ1
LinkDB
All DBs
Position
Unknown
AA seq
502 aa
AA seq
DB search
MDAQSQQQQVGVVKKKETRGRKPKPKEEKKDDQQQQAKMKKAHQQATVDDKYTQWKSLVP
VLYDWLANHNLVWPSLSCRWGPQLEQATYKNRQRLYLSEQTDGSVPNTLVIANCEVVKPR
VAAAEHISQFNEEARSPFVKKYKTIIHPGEINRIRELPQNTKIVATHTDSPDVLIWDVEA
QPNRHAVLGATSSRPDLILTGHQDNAEFALAMCPTEPYVLSGGKDKTVVLWSIQDHISGA
TTDPAATKSPGSGGSIIKQNSKPGDGNDKAADGPSVAPRGIYYGHEDTVEDVAFCPSSSQ
EFCSVGDDSCLILWDARVGSSPATKVEKAHNADLHCVDWNPHDDNLILTGSADNSVRLFD
RRNLTSGGVGAPIYKFEGHKAAVLCVQWCPDKSSVFGSSAEDGLLNIWDYEKVSKERTTK
GPSSPPGLFFQHAGHRDKVVDFHWNASDPWTIVSVSDDCDTTGGGGTLQIWRMSDLIYRP
EEEVLAELEKFKSHVVSCASKP
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atggacgctcagtcgcagcagcaacaagtcggagttgtgaagaagaaggagactcggggc
cgaaagcccaagcccaaggaagaaaagaaggacgaccagcaacagcaggccaagatgaag
aaggcccaccaacaagccaccgtcgacgacaagtacactcagtggaagtcactcgtccct
gtcctctacgactggctcgctaaccacaacctcgtctggccctccctctcttgccggtgg
ggtcctcagctcgagcaagctacatacaagaatcgccagcgtctctacctttctgagcag
actgatggaagtgttccaaatacgctggttattgcaaactgcgaggttgtcaaacctaga
gttgccgctgcagagcatatatctcagttcaatgaagaagcccgctcaccatttgttaag
aagtacaagaccatcatacatcctggagagataaacagaatcagagaacttccacagaac
actaagatagtggccacacatacagatagccctgatgttcttatttgggatgtggaagct
caaccaaaccgtcatgctgtccttggagccacaagttcacgcccggatttgattttgact
ggacatcaagataatgcagaatttgcccttgcaatgtgtccaactgaaccatatgtgctg
tctggagggaaggacaaaacagtggttttgtggagtattcaggaccatatatcaggagct
accacagatccagcagcaaccaagtctccaggatctggtgggtcaattattaaacaaaac
tcaaagcctggggatggtaatgataaagctgctgatggcccttctgttgcaccacgagga
atctactatgggcatgaggatacagttgaagatgtggcattttgcccatctagttcacag
gagttctgtagtgttggtgacgattcctgcctcatattatgggatgcacgtgtgggctct
agccctgccacaaaggttgaaaaagcacataatgctgatcttcactgtgttgattggaat
ccccatgatgataaccttattctaacagggtcagcagataattcagttcgcttgtttgat
cgccgaaatctcacttctggtggagttggggcacctatttataaatttgagggtcacaaa
gcagctgttctttgtgtccagtggtgtccagacaaatcgtctgtctttggaagctctgca
gaagatggtcttttaaacatttgggattatgagaaggtaagtaaggagcgaactaccaaa
ggcccgagttctccacctggtctgtttttccagcatgctgggcacagggacaaagttgtt
gatttccattggaatgcatccgatccatggaccatcgttagtgtgtctgatgactgtgat
actactggtggaggggggacattgcagatatggcgaatgagtgacctgatctacagacct
gaagaggaggttctggcagagcttgagaagttcaagtcccatgttgtttcctgtgcttca
aagccttga
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integrated database retrieval system
