Prunus avium (sweet cherry): 110751265
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Entry
110751265 CDS
T05161
Name
(RefSeq) probable pectate lyase 3 isoform X1
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
pavi
Prunus avium (sweet cherry)
Pathway
pavi00040
Pentose and glucuronate interconversions
pavi01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pavi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
110751265
Enzymes [BR:
pavi01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
110751265
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
110751265
NCBI-ProteinID:
XP_021807395
UniProt:
A0A6P5RRD0
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All DBs
Position
Unknown
AA seq
372 aa
AA seq
DB search
MKQNGTRRNLRGQKKYNGRCMATNPIDACWRCDKNWANNRKRIADCVQGFGKRTTGGKAG
PFYVVTDPSDLDLLNPKPGTLRHAVIQKGPLWIIFARSMVIKLQQELIVTSDKTIDGRGA
NVNIYDGAGITLQFVKNVIITNLHIKKIVEKEGGMIRDSVDHFGQRTKSDGDGISIFGSS
NIWIDHVSMEKCADGLIDAIMGSTAITISNSHFTHHNDVMLFGASNSYTQDKIMQITVAF
NHFGQGLVQRMPRCRHGFFHVVNNDYTHWLMYAIGGSMNPTIISQGNRFIAGLNAAAKEV
TKRDNTPEAEWKKWEWRSEGDLMMNGAIFVESGSGASNHPARMDLMPFKPGTYVPKLTKF
SGALECFVGKPC
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atgaagcaaaatggcacaagaaggaacttgaggggccaaaagaagtacaatggtcgatgc
atggccaccaacccaattgatgcatgctggaggtgtgacaaaaactgggccaacaaccgc
aagaggatcgccgactgcgtccaaggcttcggcaaaaggaccaccggcggcaaggccggc
cctttttatgtggtgactgatccctctgacttggacttgctaaaccctaaacctggaacc
ctgcgtcacgcagtgattcagaaagggcctctttggatcatctttgcacgcagcatggtg
attaagctgcagcaagagctgattgtgactagtgacaagaccattgatggtaggggagcc
aacgttaacatatacgacggcgctggcattaccctccagtttgtgaagaatgtgatcatc
accaaccttcacatcaaaaagattgtggagaaagaaggtggcatgatcagagactccgtc
gaccattttggccagaggaccaagagtgatggcgatggcatctccatctttggctcctcc
aacatttggattgaccacgtttccatggaaaagtgcgcagatgggctcatagacgccatc
atgggttccacagctatcaccatctccaactcccacttcactcaccacaatgacgtgatg
ttgttcggtgccagcaacagctacactcaagacaagatcatgcaaatcacggtggccttc
aaccacttcggccagggattggtgcagaggatgccaaggtgccggcacggattcttccac
gtggtgaacaacgactacacccactggctcatgtatgccattggtggcagcatgaaccct
accatcatcagccagggtaacaggttcattgctggtttaaacgcagccgccaaagaggtg
accaagagggacaacacaccagaggcagagtggaagaaatgggaatggagatcagaggga
gacttgatgatgaatggagcaatcttcgttgaatctggatccggagcgagcaatcaccca
gcaaggatggatttgatgcccttcaagccgggaacctatgtcccaaagctcacaaagttt
tccggtgctcttgaatgctttgttggcaaaccttgctag
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