Prunus avium (sweet cherry): 110751532
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Entry
110751532 CDS
T05161
Name
(RefSeq) autophagy-related protein 16
KO
K17890
autophagy-related protein 16-1
Organism
pavi
Prunus avium (sweet cherry)
Pathway
pavi04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
pavi00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
110751532
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pavi04131
]
110751532
03029 Mitochondrial biogenesis [BR:
pavi03029
]
110751532
Membrane trafficking [BR:
pavi04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
110751532
Others
Specific organelles associated proteins
Auto phagosome
110751532
Mitochondrial biogenesis [BR:
pavi03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
110751532
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
EIF3I
WDR55
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
WDR90_beta-prop_4th
Beta-prop_EML
ANAPC4_WD40
WD40_MABP1-WDR62_1st
ATG16
Beta-prop_RIG_2nd
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
NBCH_WD40
Beta-prop_IFT140_1st
Beta-prop_HPS5
Beta-prop_WDR35_TULP_N
Beta-prop_SCAP
Beta-prop_IFT122_1st
Beta-prop_VPS8
Beta-prop_NWD2_C
WD40_RFWD3
Beta-prop_SPT8
Beta-prop_DCAF4
Beta-prop_WDR19_1st
Beta-prop_NUP159_NUP214
WDR54
Beta-prop_EIPR1
eIF2A
Beta-prop_Vps41
Beta-prop_Nup120_160
Ge1_WD40
PEP5_VPS11_N
Cytochrom_D1
PQQ_2
DUF7165
Beta-prop_IP5PC_F
Beta-prop_RIG_1st
DUF948
Motif
Other DBs
NCBI-GeneID:
110751532
NCBI-ProteinID:
XP_021807700
UniProt:
A0A6P5RS79
LinkDB
All DBs
Position
Unknown
AA seq
508 aa
AA seq
DB search
MSQEEIAREAIKHALKALRKRHLLEEGAHAPAFIALARPIAHQGSEWKEKAESLELELQQ
CYKAQSRLSEQLVVEVAESRASKASLQEKEAAVADLQKELTEKRDECSQLTTDLEEKIKA
LDLVVSENKEIRAQLEEMSIRAKNAEAESKVLIDRWMLEKMKDAERLNEANALYEDMIER
LRASGLEKLARQQVDGVVRQSEEGAEYFVESTIPSACKSRIHAHEGGCASILFEYNSGKL
ITGGQDGSIKMWDTNTGALNHTLHGCIGSVLDITITHDNRSIIAASSSNKLYAWDVSSGR
VRHTLTGHMDKVCAVDVSNSSRHVVSAAYDRTIKVWDLQKGYCTNTIIFPKNCNALCFSM
DGQTICSGHVDGNLRLWDIEKGKLLSEVAAHSNAVTSISLSRNGNVVLTSGRDNVHNLFD
MRSLEVCGTLRATGNRVASNWSRSCISPDDNYVAAGSADGSVYIWSISKADIVSTLKEHT
ASVLCCSWSGHGKPLASADKNGIVCTWA
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atgtcacaggaggagatagcaagggaagcgataaagcacgcactgaaggctcttcggaag
cggcatttgctcgaagaaggtgctcatgctccggcttttatcgctcttgcgaggccaatt
gctcatcagggctcagaatggaaggagaaagcagagagtttggaactcgaacttcagcaa
tgttacaaagctcaatctcgattgtccgagcaacttgtggtggaagtagcagagtccaga
gcttcaaaagcttcacttcaagagaaagaagcagcagtggctgatctccaaaaggagtta
acagaaaaaagggatgaatgctctcaattaacgactgacttagaagagaagattaaagcc
ttagacttggttgtgagtgagaacaaggaaataagagcgcagcttgaagaaatgtctatt
agagctaagaatgctgaggctgaaagtaaggtgttaattgaccgctggatgttggaaaag
atgaaggatgctgaacgccttaacgaggcaaatgcactctatgaagatatgattgagcgg
ctcagggccagtggtctggaaaaacttgctaggcagcaagtagatggtgtggtccgccaa
agtgaagaaggtgctgagtactttgtggagtcaacaattccctctgcatgcaagagcagg
atccatgcccatgaaggtggttgtgcttccatattatttgagtacaattctggcaaattg
attactggcggacaggacgggtccatcaaaatgtgggatacaaatactggggcactaaat
catacacttcatggttgcattggttccgttcttgatattaccattacccatgataataga
tctatcattgcagcaagcagctcaaacaaattgtatgcctgggatgttagctcggggagg
gttcgccatactctcactggccacatggataaagtatgtgctgtagatgttagcaattcg
agtcgtcatgttgtgagcgcagcctatgatcgtaccataaaagtttgggatttgcagaaa
ggttactgcaccaacacaattattttccccaaaaactgcaatgctctttgcttcagcatg
gatggacagaccatatgttctgggcacgtcgatggaaaccttcgcttgtgggatattgag
aaaggaaagctactcagtgaagtagctgcacattcaaatgctgttacatccatatctttg
tcccgaaatggcaacgttgtattgacaagtggaagagacaacgtgcataatttgtttgat
atgcggtctctggaagtctgcggcacattaagggccaccggaaacagagtggcgtctaac
tggagccggtcctgtatcagtccagacgacaattatgttgccgctggatctgccgatggt
tctgtgtatatttggtcaatctctaaggccgacattgtgagcactctgaaggaacacact
gcatctgtgctgtgttgttcatggagtgggcatggaaaacctctagcttctgcggacaag
aacggcattgtttgcacttgggcgtga
DBGET
integrated database retrieval system