Prunus avium (sweet cherry): 110751702
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Entry
110751702 CDS
T05161
Name
(RefSeq) polygalacturonase-like
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
pavi
Prunus avium (sweet cherry)
Pathway
pavi00040
Pentose and glucuronate interconversions
pavi01100
Metabolic pathways
Module
pavi_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
pavi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
110751702
Enzymes [BR:
pavi01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
110751702
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Ortholog
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GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
VacA2
Motif
Other DBs
NCBI-GeneID:
110751702
NCBI-ProteinID:
XP_021807900
UniProt:
A0A6P5RSQ3
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All DBs
Position
Unknown
AA seq
444 aa
AA seq
DB search
MEDFKGEKVEDMVVMAEEWLGSPLGCLQRPMGGKKMRYEIRGVLATEVTTSCFSRVALLI
LYILHQSCVSESTLIFNVLSFGAKPNGVIDSTQAFLDVWTAACASSDSTTIRVPKGRYLL
RNAMVFKGDNCKSTDITFRIDGTLIASSDYRILGQANNWLSFEGVTGVSIIGGALDAKGT
ALWACKLAGSIDCPNGGATSLSFTNSKNININGLMSLNSQMFHIVINGCQDVRIKGVRVN
AAGNSPNTDGIHVQLSRNVAIFNTSIKTGDDCVSIGPGTKDLWIEKITCGPGHGISIGSL
AKDLEEEGVQNVTVKNAIFKGTQNGLRIKSWARPSNGFVQGVQFLDVVMLNVQNPIVIDQ
NYCPHNINCPAQASGVKVSDVMYRNIQGTSATAIAIKFDCSATNPCSGIRLENVSLTCRN
QEVQSHCANANGKIVGTVQPNSCL
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atggaggatttcaagggggagaaagtagaagacatggttgtgatggctgaggaatggcta
ggatcgccgctgggatgcttgcagcggccgatgggaggaaagaaaatgagatatgaaata
aggggagtgctagcaactgaggttacaacaagttgttttagcagagtagcactactcatc
ctatatatcctacaccaatcatgtgtttctgagagtacattaattttcaatgtcctaagc
tttggagccaagcctaacggtgtaatagattctacacaagcttttctggatgtatggact
gcagcatgcgcctcctctgattccactactatacgtgtaccaaaagggaggtatttgctt
cgcaatgctatggttttcaaaggtgataactgcaaaagcacagatattacttttcgaatt
gatggaacattgatagcttcgtctgattaccgaatccttggccaagctaacaactggcta
agcttcgaaggagttaccggtgtgtccattatcggaggtgccctcgacgctaaaggtacc
gccttgtgggcatgcaagttagctggaagcattgattgccccaacggaggagccacgagt
ctgagttttacaaactccaaaaacattaacatcaatggactaatgtcattgaacagccag
atgttccacattgtgataaacggctgccaagatgtgcgcatcaaaggggtcagagtcaat
gcagctggaaatagcccaaacactgatggcatccatgtccaattgtcaagaaatgttgca
atcttcaacacctctatcaaaactggagatgattgtgtctcgattggccctggaacaaag
gacttgtggatagagaaaataacttgtggtcctggccatggcattagcatagggagttta
gccaaagacttggaagaggaaggggtccaaaatgtgacagttaaaaatgcaattttcaag
ggtactcaaaatggtttgaggattaagtcttgggcaaggccgagcaacggatttgttcaa
ggtgttcaattccttgatgtcgtaatgttaaatgtccaaaatcctatcgtaatagaccaa
aactactgcccacacaacatcaactgccctgctcaggcatcaggtgtgaaagttagtgat
gtcatgtaccggaacattcaaggaacatcagctacagccatcgcaataaaatttgattgt
agcgcaacaaatccatgtagtgggataagactcgaaaacgtgagtttgacctgcaggaat
caagaggttcagtcacattgtgccaatgcaaatggaaagattgttggcactgttcaacca
aacagttgtttgtaa
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