Prunus avium (sweet cherry): 110752055
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Entry
110752055 CDS
T05161
Name
(RefSeq) transcription initiation factor IIB-like
KO
K03124
transcription initiation factor TFIIB
Organism
pavi
Prunus avium (sweet cherry)
Pathway
pavi03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
pavi00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
110752055
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pavi03021
]
110752055
Transcription machinery [BR:
pavi03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
110752055
Prokaryotic type
Archaeal type
TFB
110752055
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Ribosomal_S27e
Cyclin_N
HTH_5
HTH_Tnp_ISL3
Orthopox_B11R
HTH_TbsP_C
zinc_ribbon_6
Motif
Other DBs
NCBI-GeneID:
110752055
NCBI-ProteinID:
XP_021808334
UniProt:
A0A6P5RYT3
LinkDB
All DBs
Position
Unknown
AA seq
310 aa
AA seq
DB search
MSDIFCRDCNMLTEVVFDHSAGHTICSECGLVLESRSVDKTSEWRSFADESNGNDLNRVG
GPVNPILAHGGLSTVIAGPSNGASSNALPSSVGRWQSRASKPDRHLLNIFSAIGIMADRL
GLVTTIKDRANEIYKKVEDQRPLRGRNQDAVVAACLYIACRQENKPRTVKEICSAVSGAS
KKEIGRAKEFIWKHLEVEIGQEIGTIHAGDYLRRFCSILGMKNLEVKAAQETVQKSEDLV
IRRSPISVAAAVIYIITQLSDDKRTFKDISLATRVAEGTIKNSYKDLYPHLPRLIPYWFA
KEEDVKNLCN
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgtcggacatattttgccgcgactgtaacatgctgacggaggttgtgttcgaccactca
gcgggccacacgatatgctcggagtgcgggctcgtgctggagtctcgctcggtcgacaag
acttccgagtggcgctccttcgccgacgagtccaacggcaacgacctgaaccgggtcggc
ggacctgttaacccgattttggcccacggtgggctttccaccgttatcgccggtcccagt
aacggcgcttcctccaatgccttgccttcctccgtcggcaggtggcagagccgcgcctct
aaacccgaccgtcatcttctcaacatcttcagcgctattggtattatggccgacaggttg
gggctcgtcacaaccataaaggatcgagccaatgagatatataagaaggtggaagatcaa
agacctctgagaggacgcaatcaagatgcagttgtggctgcttgcctctacattgcctgt
agacaagaaaataagcctcgtactgtgaaagaaatatgctctgcagtcagtggagctagc
aagaaagaaattgggcgggccaaagagttcatttggaaacaccttgaggttgagataggt
caggaaataggaactattcatgctggagactatctgagacgtttttgctccattcttgga
atgaagaatctggaagtcaaggctgcccaagaaactgtgcagaaatctgaagatcttgtc
ataaggaggagcccgatatcggtggcagctgcagttatatacatcataacccaactatcg
gatgacaaaaggacttttaaagatatttcgctcgctactagagtggctgaagggaccatc
aagaattcctacaaagacttgtatcctcatctgccacggctaataccttactggtttgcc
aaggaggaagatgtcaagaatctctgcaactaa
DBGET
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