Prunus avium (sweet cherry): 110752099
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Entry
110752099 CDS
T05161
Name
(RefSeq) pectate lyase-like
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
pavi
Prunus avium (sweet cherry)
Pathway
pavi00040
Pentose and glucuronate interconversions
pavi01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pavi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
110752099
Enzymes [BR:
pavi01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
110752099
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Ortholog
Paralog
GFIT
Motif
Pfam:
Pectate_lyase_4
Pec_lyase_N
Beta_helix
Motif
Other DBs
NCBI-GeneID:
110752099
NCBI-ProteinID:
XP_021808387
UniProt:
A0A6P5S135
LinkDB
All DBs
Position
Unknown
AA seq
440 aa
AA seq
DB search
MAMEAEKLNVVILCVFVIAITIPTTVRANIADFDEHWQQRAAEAKKAAHEAYHDDPIAVT
EHFNKQVLDTFDYANNTRRNLNQKYKGPCMATNPIDRCWRCDPNWEKNRKRLANCALGFG
RKTTGGKLGPIYVVTDNTDADLVNPKPGTLRHAVIQNGPLWIIFARDMRIKLTEELLVAS
DKTIDARGANVHILDGAQISLQFVKNVIISNLHIHNNKPGNGGLIRDSINHFGQRTRSDG
DGISMYGATNVWIDHLSLSNCADGLIDAIQGSTAITISNCHLTNHNDVMLFGSSDSNSQD
QVMQITLAFNHFGKGLVQRMPRCRWGFFHVVNNDYTHWLMYAIGGSQHPTIISQGNRFIA
PSNQATKEVTHRNNAQESEWRSWNWRSENDLMMNGAFFVQSGSPIRNLPKADMIQAKPGS
FVTRLTRFAGPLKCIKNKPC
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atggcaatggaagctgagaagctaaatgttgtgattttatgtgtttttgtaattgcaata
acaatcccaacaacagtgagggcaaacattgcggattttgatgagcattggcagcagaga
gccgcagaagccaagaaggccgcccatgaagcctaccatgatgatcctatagcagtcacc
gagcatttcaacaagcaagtccttgacaccttcgattatgcaaacaacacaagaaggaac
ttgaaccagaagtacaagggtccatgcatggctacaaaccctatcgatcgttgttggcga
tgcgatccaaactgggaaaaaaatcgcaagaggctagccaattgtgcccttggctttggg
cgcaagacaactggagggaaacttggaccaatatatgtggtcacagataacaccgacgct
gacctagtgaacccgaaacctgggacactccgccacgccgtgattcaaaatgggccactt
tggatcatatttgctcgggacatgaggataaagctgactgaagagcttctggtggccagt
gacaagaccattgatgcacgaggtgcgaacgtgcacatccttgacggcgcccaaatttca
ttgcagtttgtgaagaatgtgatcatcagcaacctccacatccataacaacaagcctgga
aatggcggcctgattagggactctatcaatcactttggacagcgcacgcgtagcgacgga
gatggaatatccatgtatggagccacaaacgtttggatagaccatctctctttgtcaaat
tgcgcagatgggctcattgatgccatccaaggctctacggccatcaccatatccaactgt
cacctcaccaatcataatgatgtgatgttgtttggttcaagtgatagcaactctcaggat
caagtgatgcagataactctggctttcaaccatttcgggaaggggttggttcagcggatg
ccaaggtgccggtggggatttttccatgtcgtcaacaacgactacactcattggcttatg
tatgccattggtggcagccaacaccctaccataattagccagggcaaccggttcattgct
ccgtcgaaccaagcgactaaagaggtgactcataggaacaatgcacaagagagcgagtgg
agatcatggaattggagatcagagaatgatcttatgatgaacggagcattctttgttcaa
tctggaagccccattaggaatctcccaaaggcagacatgatccaggcaaaacctgggtca
tttgtgaccaggctcacgcgctttgccggtcctcttaaatgcattaaaaataagccatgt
taa
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