Prunus avium (sweet cherry): 110752233
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Entry
110752233 CDS
T05161
Name
(RefSeq) transcription initiation factor TFIID subunit 4b-like isoform X1
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
pavi
Prunus avium (sweet cherry)
Pathway
pavi03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
pavi00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
110752233
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pavi03021
]
110752233
03036 Chromosome and associated proteins [BR:
pavi03036
]
110752233
Transcription machinery [BR:
pavi03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
110752233
Coactivators
SAGA/TFTC/STAGA complex
110752233
Chromosome and associated proteins [BR:
pavi03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
110752233
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TAF4
RST
SPMIP10-like
Motif
Other DBs
NCBI-GeneID:
110752233
NCBI-ProteinID:
XP_021808535
UniProt:
A0A6P5RUM0
LinkDB
All DBs
Position
Unknown
AA seq
929 aa
AA seq
DB search
MDPSIVKKLLEDDEDETMHSRADLEAFQAALNKDIEGDVSASQPSDSDTAVLSQGSNNTS
SQSLLQLSTASQDENTAGQIQQDQKIAQHQELHLYEMEPKQQGSVAENMQQKNDASQVLN
HFPLPQKRPHGDLQEGQAEQKPIQIPETTGMLISEKHPSSTEEHGIAPNLKSESQYLKLQ
KMSSQQSMITEQPRSPSNESRQVPFYQLYPLLLPQLNKDRGRQLTTLFGRLKSRQIRKDA
FVRELKSIVGDEMLRMAVKEVPLMPSPKHQLLPKASVQQQPPRMLSISASATQLTNPRSS
ALHLRGPNSATDPSHSLPSTVQVQTDSSHPLIKNSARKLPEAECHSDSEGMQVSQISSSS
VVTTNQERECFSVPMHGNAGRTCHLFSGTNVNTCALPVKPQPSDAQLRQVLQHQSMGSAQ
SGGEAHGASIMSGSKTERQNSMNEPSRLQGGSLIHITTNATLRQNPNPSQSSNKGQSSRP
VSSMAYVKQESIDQTAEQQHKPPLPSSHGLPSVSAGVLEQGNASSVISMDESLEKQPSRM
GVSSSPSTITVPQSSVSPSVMMQVNPSVSLGPRIMSGTSPCGINNKTPPKKPSIGRKKPL
EALGSSPPQSSKKQKVSVAFSDIEQLNDVTAVSGVNLREEEEQLFPGPKEDSRASEASRK
SVQEEEERLILEKAPLQKKLAQIMVKCGLKSVTHDVERCLSLCVEERMRGLINNLIRLSK
QRVDAEKSRHHTITNSDVRQQIMDLNQKAREEWEKKQAEAEKIRRLNEPEVDNGVDGDEE
KDEGRPKSFKTNIEADGKLRTTAANVAARAAVGGDDMFSKWQLMAQARQKREGEIDAASG
SQPGKDVNHKPTSTTGRIMKGSQEAEKRGDPAHVATAGPIRKSGRNQVIMPQTRMARTIS
VKDMIAALEREPQMSKSMLIYRLHERIQS
NT seq
2790 nt
NT seq
+upstream
nt +downstream
nt
atggatccatccattgtgaagaagctccttgaagacgacgaggacgaaaccatgcattcc
agggcggatttggaggccttccaggctgccctgaataaggacatagaaggagatgtgtct
gcttcccagccgtctgattcagacaccgcggttttgtctcaaggaagcaataatacttct
agtcagtcattactgcagttgagtactgctagccaggatgaaaatacagctggtcaaatt
caacaagaccaaaaaattgcacaacatcaggaactgcatttgtatgaaatggaaccaaag
caacaaggatccgttgctgagaatatgcaacaaaaaaatgatgcctcacaggtacttaat
cactttcctttaccccagaagcgaccgcatggtgatcttcaagaaggacaggcagaacag
aagccaatccagattcctgaaacaactggaatgctgatttctgaaaaacaccccagctca
acagaggagcatggcatagcacctaatctcaaaagcgaatctcagtacttaaagcttcag
aagatgagcagtcaacaatcaatgatcacagagcagccaagaagcccttcgaatgaaagc
agacaagtaccattttaccagttatatcccctcttattgccccaactaaataaagacaga
ggcaggcaacttactactctatttggtagactcaagagccgtcaaatccgcaaagatgct
tttgtcagggaacttaaaagtattgttggggatgagatgctcagaatggcagtaaaggaa
gtgccactaatgcctagtcctaaacatcagttactacctaaggcctcggtccagcaacaa
cctccaaggatgctatctattagtgcaagtgccacacagttgactaaccctcgttcatct
gcacttcatctgagaggtcccaattctgccactgacccatcacacagtctcccttcaaca
gttcaggtacagactgattcaagccatccgctcattaaaaatagtgctagaaaattgcca
gaagcagaatgtcactcagattctgagggaatgcaagtaagtcaaatttcttcctctagt
gtggtaactaccaatcaagaaagggagtgcttctcagttcctatgcatggaaacgctggt
cgtacttgtcacctgttttcagggacaaatgtcaatacttgcgcattgcctgtcaaaccg
cagccttctgatgcacaactgagacaagtcctacaacatcaaagcatgggttctgctcag
tcaggtggggaagcacatggagcgagcatcatgagtgggtccaaaacggagaggcaaaat
tctatgaatgaacctagtagactgcaaggtggatctcttattcacattacaactaatgca
actttacgacagaatcctaatccttcgcaatcctcaaataaagggcagagttcccgtcct
gtgtcatcaatggcttatgtcaaacaggaatcgattgatcagactgctgagcagcagcac
aagcctccattgcctagttcacatggattgccttcggtttctgctggagtacttgaacag
ggaaatgcatcatctgtaatttcaatggatgagtccttagagaagcagccttctagaatg
ggtgtttcatcatcgccttctacaatcacagtgcctcaaagttcggtgtctccttccgtc
atgatgcaagtcaatcctagtgtctcgttaggccctcggataatgtctggaacctcccct
tgtgggattaataataaaacacctccaaaaaagccttctattggccgaaagaagccgctt
gaagcacttggttcttcaccaccgcaatcaagtaagaagcaaaaagtaagtgtagcgttt
tcggatattgaacaactcaatgatgtcactgctgtcagtggagttaatcttagggaagag
gaagagcagctgtttccagggcccaaggaggatagtcgagcttcagaagcctctcgaaaa
tctgtgcaagaagaagaggaaaggctgattttggagaaggctccactgcagaaaaaatta
gcccaaattatggtcaaatgtggtctgaaaagtgtaacccatgacgtggagcgatgcttg
tcactgtgtgtggaggaaagaatgaggggactaataaataatttaatccgactgtcaaag
cagcgggttgatgctgagaaatcaagacaccacactattactaactctgatgttcggcaa
caaattatggatctcaatcagaaagctagggaagaatgggagaaaaagcaggctgaggca
gaaaagatccggaggcttaatgagcctgaggttgacaatggagtcgatggagacgaggag
aaggatgaaggccgtcctaaatcatttaagacaaacatagaggcagatggaaaactgagg
acaacagcagcaaatgttgctgcccgtgctgcagttgggggagacgacatgttctcaaaa
tggcaactcatggcacaagcccggcaaaaacgtgaaggtgagattgatgcggcatctggg
tcccagccaggtaaagatgtaaaccacaaacctacatcaacaactggaaggatcatgaag
ggcagtcaagaagcagagaaaaggggtgatccggctcatgttgctacagccgggccaatt
agaaaatctggaaggaaccaagttatcatgcctcaaacaaggatggctcgtactatatcc
gtcaaggatatgattgctgccttggaaagggaacctcagatgtcgaagtctatgttgata
tatcggttgcatgagagaatccaatcctag
DBGET
integrated database retrieval system
