Prunus avium (sweet cherry): 110752443
Help
Entry
110752443 CDS
T05161
Name
(RefSeq) pectate lyase-like
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
pavi
Prunus avium (sweet cherry)
Pathway
pavi00040
Pentose and glucuronate interconversions
pavi01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pavi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
110752443
Enzymes [BR:
pavi01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
110752443
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pectate_lyase_4
Pec_lyase_N
Beta_helix
Motif
Other DBs
NCBI-GeneID:
110752443
NCBI-ProteinID:
XP_021808791
UniProt:
A0A6P5S5J3
LinkDB
All DBs
Position
Unknown
AA seq
452 aa
AA seq
DB search
MASKLDLVLFMISFCILVPSLRASIANDSNVGQFDAVWQERALKAEKTALKAYQPNPEKV
AEDFNESVQEVDDFNFEDDAQVSNITGRHLLGKKYKGPCKATNPIDRCWRCREDWANNRK
KLADCVKGFGRRTRGGKRGGFYVVTDPSDSNVVEPKPGTLRHAVIQPQPLWIIFARSMTI
RLTQELIMTSHKTIDARGANVHIAHGAGLTLQFIQNVIIHGLHIHDIVPGSGGTIRDSVD
HFGTRTQSDGDGISIFGSSHIWLDHLSMWNCADGLIDAIQGSTAITISNCHFTRHNDVML
FGASDSFAGDAIMQITVAFNHFGKGLVQRMPRCRWGFIHVVNNDYTHWLMYAIGGSSHPT
IISQGNRFIAPPNHAAKEVTKRDYAPVDVWKNWQWRSEGDLMLNGAFFVESGVAKKNHGF
GRLDMISAKPGTFVTRLTRFAGSLGCRVGKKC
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgaagctcgatttagtccttttcatgatttctttctgcatactggttccaagc
ctgagagcatccattgctaacgacagcaacgttggtcagtttgatgctgtctggcaggaa
cgagcgctgaaagctgagaaaactgccctcaaggcctatcaacccaaccctgaaaaagtt
gcagaagacttcaacgaaagtgttcaagaggtcgatgatttcaactttgaagatgatgct
caggtgagcaacatcacagggaggcatctactggggaaaaaatacaaagggccctgcaag
gccacaaacccaattgaccgctgctggcgatgcagggaggactgggccaacaaccgtaag
aagttggccgactgcgtgaagggcttcgggcgcaggacacgtggaggcaagagaggagga
ttctacgtcgtcaccgacccttccgacagcaacgtcgtcgaacccaagcccgggactctc
cgccacgccgtcattcaaccgcagccgctgtggatcatatttgcacgcagcatgactatc
aggttgacgcaggagctcataatgacgagccacaagacaattgacgcacgtggggcaaat
gtgcacattgctcatggtgctgggctcacgctccagttcatccagaatgtcatcatccat
gggctccacatacacgacattgttcctggaagcggcggcacgatcagggactctgtggac
cacttcgggaccagaacacagagtgatggagatgggatttccatttttgggtcgtctcac
atttggctcgaccatctgtctatgtggaactgcgctgatgggctcatcgacgccatccaa
ggctccacggccatcaccatctccaactgccacttcacccgtcacaatgacgtgatgctg
tttggggcgagcgattcgtttgcaggggatgcgattatgcaaattacggtggcgttcaac
cattttggaaagggattggtgcagagaatgccaagatgcagatggggatttatccatgtt
gtgaacaatgactatacacactggctcatgtatgccattggaggtagctcacacccaact
attatcagccagggtaaccgtttcatagccccaccaaaccacgctgcaaaggaggtgacg
aagagggactatgcgccggtggatgtgtggaagaattggcaatggagatcagaaggagat
ctgatgttgaatggagccttctttgttgaatctggagttgctaaaaagaaccatggattt
ggaaggctggacatgatatctgcaaagccaggcacattcgttacaaggctcacacgcttt
gcaggttcacttggttgcagggttggcaaaaaatgctag
DBGET
integrated database retrieval system