Prunus avium (sweet cherry): 110752451
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Entry
110752451 CDS
T05161
Name
(RefSeq) FACT complex subunit SSRP1 isoform X1
KO
K09272
FACT complex subunit SSRP1/POB3
Organism
pavi
Prunus avium (sweet cherry)
Brite
KEGG Orthology (KO) [BR:
pavi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pavi03000
]
110752451
03036 Chromosome and associated proteins [BR:
pavi03036
]
110752451
Transcription factors [BR:
pavi03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG2-related
110752451
Chromosome and associated proteins [BR:
pavi03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
FACT complex
110752451
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PH1_SSRP1-like
POB3_N
SSrecog
Rttp106-like_middle
HMG_box
HMG_box_2
HMG_WDHD1
CHDNT
CDC45
DNA_pol_phi
Motif
Other DBs
NCBI-GeneID:
110752451
NCBI-ProteinID:
XP_021808798
UniProt:
A0A6P5S4T5
LinkDB
All DBs
Position
Unknown
AA seq
646 aa
AA seq
DB search
MTDGHLFNNISLGGRGGTNPGQLKIYSGGISWKKQGGGKVVEVDKADIVGATWMKVPRTN
QLGVRIKDGLYYKFIGFRDQDVTSLTNYFQNTCGLTPEEKQLSVSGRNWGEVDLSGNMLT
FLVDSKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNTQFV
GDENRPPAQVFRDKIMSMADVGAGGEEAVVTFESIAILTPRGRYSVELHLSFLRLQGQAN
DFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSELSMS
EELMNTKYKDKLELSYKGLIHEVFTTILRGLSGAKVTKPGKFRSCQDGYAVKSSLKAEDG
VLYPLEKSFFFLPKPPTLILHDQIDYVEFERHGAGGSNMHYFDLLIRLKSEQEHLFRNIQ
RNEYHNLFDFISSKGLKIMNLGEGQTADGVAPLLEEADDDAVDPHLVRVKNEAGGDESDE
EDEDFVIDKDDGGSPTDDSGEDDSDASESGAEKEFQKPAKKEPKREPSTSKVSSSKKQKS
KDGGEDGAKKKKQKKKKDPNAPKRAMSGFMFFSQMERENVKKSNPGIAFTDVGRVLGDKW
KKMSAEEKEPYEAKARQDKLRYKDEISGYKNPQPMNIDSGNESDSG
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
atgacggacggccacctcttcaacaatatctctcttggaggccgtggaggcactaatccg
gggcagctaaaaatatattctggagggatttcgtggaaaaaacagggaggtggtaaagta
gttgaggttgataaagctgacattgttggggcgacatggatgaaggtcccaaggactaac
caacttggtgttcggattaaagacgggttatactacaagttcattggatttcgtgaccag
gacgtcactagtttgaccaattatttccaaaatacgtgcggattaacaccagaggagaag
cagctttctgtaagcggacgtaattggggagaagtcgatttaagtgggaacatgctgact
ttcttggttgactctaagcaagcatttgaggtatctttggctgatgtttcacaaactcag
cttcagggaaaaaatgatgtcatcttagagttccatgtggatgacaccacaggagctaat
gagaaagattcattgatggaaataagttttcacataccgaactccaacactcagtttgtt
ggtgatgagaatcgtccccctgctcaagtttttcgtgacaaaatcatgtctatggcagac
gttggtgctggaggtgaagaggctgttgtcacatttgagagtattgcaatcctcacacca
aggggtcgctacagcgtggaacttcatctttcattcttgcggctacaaggacaggctaat
gattttaaaattcagtacagcagtgttgttcgactgtttcttcttcctaagtctaaccag
ccacatacctttgttgttgttactcttgatccacctatccggaaggggcaaacattgtac
cctcatattgttttgcagtttgaaactgactatgtggttcaaagcgagctgtcgatgagc
gaagaacttatgaacaccaagtacaaggacaagttagaactatcttacaagggactaatt
catgaagtgttcaccacaatattgcgtggcttgtctggtgccaaagttacgaaaccggga
aaattccgtagttgtcaagatggttatgccgtgaaatcttcattgaaagctgaagatgga
gttctatatcctcttgaaaagagcttctttttcctacctaaacctcccacccttattctt
catgatcagattgactatgtggaatttgagaggcatggcgctggtggctcaaatatgcac
tattttgatcttctgatcagactcaaaagtgagcaagaacacctgtttcgaaacattcag
aggaatgaatatcataatctttttgacttcatcagttcaaagggtctcaagatcatgaac
ttaggagaaggccaaacagcagatggtgtggctcctcttcttgaagaggcagatgatgat
gctgttgacccacaccttgtccgtgtgaagaatgaagctggtggtgatgagagtgatgaa
gaggatgaagattttgtcattgacaaggatgatggaggttctcctactgatgattctgga
gaggatgattcagatgctagtgaaagtggagctgagaaagagtttcagaagcctgctaaa
aaggagcctaaaagggaaccttcaacttccaaggtgtcatcttccaagaaacaaaaatcc
aaagatggaggtgaagatggtgcaaagaagaagaagcagaaaaagaaaaaggatccaaat
gcaccaaaaagagcaatgtctggtttcatgttcttctcacaaatggagagagagaatgta
aagaaaagtaaccccggaattgcatttaccgacgtggggagagtacttggagataagtgg
aaaaagatgtcagcggaggagaaagaaccctatgaagcaaaggctcgtcaagataaatta
cgctacaaggatgaaattagtggctacaagaacccccaacccatgaatatagattcaggg
aacgaatctgacagcgggtag
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