Prunus avium (sweet cherry): 110753318
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Entry
110753318 CDS
T05161
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit B
KO
K07466
replication factor A1
Organism
pavi
Prunus avium (sweet cherry)
Pathway
pavi03030
DNA replication
pavi03420
Nucleotide excision repair
pavi03430
Mismatch repair
pavi03440
Homologous recombination
pavi03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
pavi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
110753318
03420 Nucleotide excision repair
110753318
03430 Mismatch repair
110753318
03440 Homologous recombination
110753318
03460 Fanconi anemia pathway
110753318
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pavi03000
]
110753318
03032 DNA replication proteins [BR:
pavi03032
]
110753318
03400 DNA repair and recombination proteins [BR:
pavi03400
]
110753318
Transcription factors [BR:
pavi03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
110753318
DNA replication proteins [BR:
pavi03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
110753318
DNA repair and recombination proteins [BR:
pavi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
110753318
MMR (mismatch excision repair)
110753318
DSBR (double strand breaks repair)
HR (homologous recombination)
110753318
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
Motif
Other DBs
NCBI-GeneID:
110753318
NCBI-ProteinID:
XP_021809895
UniProt:
A0A6P5RYP6
LinkDB
All DBs
Position
Unknown
AA seq
609 aa
AA seq
DB search
MAKLGPTPDAISTILACPDPSGSVERPDIVIQVLDLGPRGITYKFTASDGKMKLKGMFSS
QLASQITSGNIQNLGLVRILDYAVNEIPGMSENYVLVKQCEVVSPALETEIKNEVKSEVK
SGEVGIILKPKQEMLSKSASQIVHEQNGNMAPAARMAMTRRVHPLVSLNPYQGNWTIKVR
VTNKGTMRTYKNARGEGCVFNVELTDEEGTQIQATMFNEAAKKFFEKFELGKVYYISKGS
LRVANKQFKTVQNDYEMTLNENSEVEEAINEAAFVPETKFNFVPVDMLGPHVNGKELVDV
IGVVQSVSPTMSIRRKSNNESIPKRDITIADETKKTVVVSLWGELATSVGQELLDIADQS
PIVAIKSLKVGDFQGVSLSTLSRSTVVVNPELSEAKRLRSWYDSEGKGASLASVGNGMSP
LAKSGARSMYSDRVSLSHISDDPSLGEDKPVFFSVKAFISSIRPDQALWYRACKTCNKKV
TEAIGSGYWCEGCQKNDEECSLRYILVARVTDASGEAYLSLFNEEAERVIGCSADELDKL
KSQEGEENPYQLKLKQATWVPHLFRVSVSQNEYNNEKRKRITARAVAPVDFAAESKLLLE
EISKMKASQ
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaactaggaccaaccccagatgcgatttcgaccattttggcctgtccggatccg
agtgggtcggttgagcggcctgatatcgtgatccaggtcctcgatctcggtcccaggggc
attacttacaagtttactgctagtgatggaaagatgaagctgaaggggatgttctcctcc
cagctggcttcccagattacctctgggaacattcagaacctgggtctcgttcgcattctg
gattatgctgttaatgagattcctggcatgtctgaaaactatgtgcttgtaaaacaatgc
gaggtggtctcacctgcacttgagacggagataaaaaatgaggtcaaaagtgaggtcaaa
agtggagaagttggcattattttgaaacccaagcaagaaatgctttccaaatcagcttct
caaattgtgcatgagcagaatggaaatatggccccggctgcgcgaatggccatgacccgg
agggttcatccgcttgtttccttgaatccttaccaaggaaattggaccataaaggttcgt
gttacaaacaagggtactatgcgtacctacaagaatgctagaggtgaaggctgtgtcttc
aatgtggagttgacagatgaagaaggcacacaaattcaagcaacaatgtttaatgaagct
gcaaagaagttctttgagaagtttgaattagggaaggtttattacatttcaaagggatct
ctaagggttgctaacaagcagtttaagacagtgcaaaatgattatgaaatgactttaaat
gagaattctgaggttgaagaagctatcaatgaagcagcttttgttcctgaaacaaaattc
aattttgttccagttgatatgttaggtccccatgttaatgggaaggagcttgtggatgtc
attggagttgttcaaagtgtgtctcctacaatgagcatcagaaggaagagcaacaatgag
agtattccaaagcgtgatattaccattgctgatgaaacgaaaaagacagttgtggtttct
ctgtggggtgagcttgcaactagtgtaggccaggaactgcttgacattgccgatcaatct
cccatagttgctatcaagtccctcaaagttggagacttccaaggtgtgtcattgtcaaca
ctgagcaggagcacagtagtagtcaatcctgaattatctgaagcaaagagattgaggtcc
tggtatgattctgaaggtaaaggggcttcattggcctctgttggcaatggtatgagccct
ttagccaagagtggagcaaggtccatgtactctgacagagtctccttgtctcatatatct
gatgacccatccttgggtgaggataagcctgtgtttttcagtgttaaagcgtttataagt
tccatcaggcctgatcaggcactgtggtaccgtgcttgcaaaacttgcaacaagaaagta
actgaagctattgggtctggttattggtgtgaagggtgccagaaaaatgatgaagaatgc
agtttaaggtatatattagttgcaagagtcactgacgcaagtggggaagcatatctttct
ctatttaatgaagaagcagagagggttattgggtgctctgcagatgagctggacaaattg
aaatcacaggagggagaggagaacccataccaactgaagctgaaacaagctacttgggtt
cctcatctttttagggtcagtgtttctcagaatgagtacaataacgagaagaggaaaagg
ataactgccagggcagttgctcctgttgattttgctgctgaatcaaagcttttgctagaa
gagatatcaaagatgaaagcttcccaatag
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