KEGG   Prunus avium (sweet cherry): 110754162
Entry
110754162         CDS       T05161                                 
Name
(RefSeq) DNA mismatch repair protein MSH2
  KO
K08735  DNA mismatch repair protein MSH2
Organism
pavi  Prunus avium (sweet cherry)
Pathway
pavi03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:pavi00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    110754162
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pavi03400]
    110754162
DNA repair and recombination proteins [BR:pavi03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    Mismatch and loop recognition factors
     110754162
SSDB
Motif
Pfam: MutS_V MutS_III MutS_IV MutS_I MutS_II
Other DBs
NCBI-GeneID: 110754162
NCBI-ProteinID: XP_021810890
UniProt: A0A6P5S1K0
LinkDB
Position
Unknown
AA seq 942 aa
MDANFEDQSKLPELKLDAKQSQGFLSFFKTLPHDPRPIRLFDRRDYYTAHGENATFIAKT
YYRTTTALRQLGSGSDGLSSVSVSKNMFETIARDLLLERTDHTLEIYEGSGSSWRLVKSG
TPGNLGSFEDVLFANNEMQDTPVVVALLPNFRENGCTVGLGYVDLTKRVLGLAEFLDDSH
FTNVESALVALGCKECLLPLESGKTSEIRTLHDALNRCGVMLTERKKTEFKMRDLVQDLS
RLVKGSIEPVRDLVSGFEFAAGALGALLSYAELLGDESNYGNYSIQRYNLDSYMRLDSAA
MRALNVLESKTDANKNFSLFGLMNRSCTAGMGKRLLHMWLKQPLLDVNEINSRLDLVQAF
VEDPALRQDLRQHLKRISDIERLMHNLEKKRAGLQHIVKLYQSSIRLPYIKSALERYDGE
FSSLIKERYWDPLELWTDDGHLNKFIALVEAAVDLDQLENGEYMISSSYDPALSALKDEQ
ESLEHQIHNLHKETARDLDLALDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLE
TRKDGVKFTNTKLKKLGDQYQRIVEEYKNCQKELVNRVVQTTATFSEVFWSVAGLLSELD
VLLSFADLASSCPTAYTRPIITPSGEGDIILEGSRHPCVEAQDWVNFIPNDCKLVRGKSW
FQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDKASISIRDCIFARVGAGDCQLRGVS
TFMQEMLETASILKGATDKSLIIIDELGRGTSTYDGFGLAWAICEHLVEVIKAPTLFATH
FHELTALAHENGVHEANMKQIVGVANYHVSAHIDSSSHKLTMLYKVEPGACDQSFGIQVA
EFANFPESVVSLAREKAAELEDFSATAVIPSDASEEVGSKRKREYDSDDMSRGAARAHEF
LKEFSNLPLETMDLKEALQKVSKMKDDLQKDSVNSHWLQQFF
NT seq 2829 nt   +upstreamnt  +downstreamnt
atggatgccaattttgaggatcagagcaagcttcccgaactcaaattagatgccaagcaa
tctcaagggtttctctcattcttcaaaaccctcccccatgacccaagacctatccgattg
tttgatcgtcgggactactatactgcccatggtgaaaatgctactttcattgcaaagacc
tactatcgtaccactactgctttgcggcagttgggtagcggatcggatggcttatccagt
gtcagcgttagtaaaaacatgtttgagacaattgcccgcgatctactactggaaagaaca
gaccacactcttgagatttatgagggtagtggctcaagttggaggctggtgaaaagtgga
acacctggaaatctcggcagtttcgaagatgttttgtttgccaacaatgagatgcaggat
accccagtggttgttgcacttttacctaactttcgcgaaaatggttgcacagttgggtta
ggatatgttgatctaactaaacgagtacttggattagctgaatttcttgatgatagccac
tttacaaatgtggaatcagctctagtcgcacttggttgcaaggaatgccttctgccccta
gagagtggcaaaacaagtgaaattagaacattgcatgatgcattgaatagatgtggtgtg
atgttaactgagaggaagaagactgaatttaagatgagagatttggttcaggatctcagt
cggcttgtcaaaggctctattgaaccagttcgagatttagtttcagggtttgagtttgca
gctggagcattgggggcattgctctcttatgcagagttacttggtgatgagagcaattat
ggaaattatagcattcaaagatataatctagacagctatatgaggttagattctgctgca
atgagggcacttaatgtcctggaaagcaaaactgatgcaaacaaaaatttcagtttattt
ggtcttatgaatagaagttgtactgctggaatgggtaaacgattactgcacatgtggtta
aaacagcctttattagatgtgaatgaaatcaattcgaggctagatttggtacaagcattt
gtggaggatcctgcacttcgccaagatttgaggcagcatctgaaaagaatctcagacatc
gagcgactgatgcacaatcttgagaagaaaagagctggtttgcagcatattgtaaaactt
tatcagtcaagtataagacttccatacattaaaagtgccctagaacgctatgatggagaa
ttttcctcgctgatcaaggaaagatattgggatcctcttgagttatggactgatgacggt
cacttaaataagttcattgctctagtggaagctgctgttgaccttgatcaacttgagaat
ggagagtacatgatatcatctagttatgaccctgcactttctgctctgaaagatgagcaa
gagtcgctggagcatcaaatacacaatttgcataaagaaactgctagagatcttgatctt
gctctagacaaggctttaaaattagataaaggcacacaatttggacatgtcttcagaatc
acaaagaaggaagagccaaaaataaggaaaaagctcacaacacaattcattgttctggaa
acccgaaaggatggagtgaaatttaccaacacaaagcttaaaaagttaggggatcagtat
caaagaatagttgaagagtataagaattgtcagaaagagctggttaaccgagttgttcaa
actacagcaactttctccgaggtgttctggtctgtagctgggttgctttctgaattggat
gtcttacttagttttgctgatttggcttctagctgtcctactgcttacactaggccaatc
atcactccatcgggtgagggggatattatattagaagggagtagacatccttgtgtggag
gctcaggactgggtaaattttatacccaatgattgtaaacttgtgagaggaaagagttgg
ttccaaatcattacaggacccaatatgggtggaaaatctacatttatccgacaggtcggt
gtgaatattctaatggcacaagttggttcttttgttccttgtgacaaagctagcatttct
attcgtgattgcatttttgctcgcgtgggtgctggtgactgccaactacgcggagtttct
accttcatgcaagaaatgcttgagactgcatctatactgaaaggagctacagataagtca
cttataatcatcgacgagttaggccgagggacatcgacttatgatggattcggtttagct
tgggccatttgtgagcaccttgttgaagtgattaaagcacctaccttgttcgcaacccat
tttcatgaattgactgcattagctcatgaaaatggtgttcatgaggccaatatgaagcaa
attgttggtgtagcaaactatcatgttagtgcacatattgactcatcaagccacaagttg
actatgctgtacaaggttgagccaggggcttgtgatcaaagttttggtattcaggttgca
gaattcgcaaactttcctgaaagtgttgtttcccttgctagagagaaggctgctgaattg
gaggatttttcagctactgcagttattccaagtgatgctagcgaagaggttggatccaag
cgcaagagagagtatgactctgatgatatgtctagaggagccgctcgggcacacgaattt
ctaaaggagttttctaatttgccattggaaacaatggatttaaaggaggctttgcaaaag
gttagcaagatgaaggatgacttgcaaaaggattcagtaaattcccactggctccagcaa
tttttctag

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