KEGG   Prunus avium (sweet cherry): 110754253
Entry
110754253         CDS       T05161                                 
Name
(RefSeq) cell division cycle 5-like protein isoform X1
  KO
K12860  pre-mRNA-splicing factor CDC5/CEF1
Organism
pavi  Prunus avium (sweet cherry)
Pathway
pavi03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pavi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    110754253
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:pavi03041]
    110754253
   03400 DNA repair and recombination proteins [BR:pavi03400]
    110754253
Spliceosome [BR:pavi03041]
 Complex B
  Other components
   Prp19 complex
    110754253
 Complex C
   Prp19-CDC5 complex
    110754253
DNA repair and recombination proteins [BR:pavi03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    110754253
SSDB
Motif
Pfam: Myb_Cef Myb_DNA-binding Myb_DNA-bind_6 TPR_HPS5_insect Hexapep
Other DBs
NCBI-GeneID: 110754253
NCBI-ProteinID: XP_021810998
UniProt: A0A6P5SB20
LinkDB
Position
Unknown
AA seq 1023 aa
MRIMIKGGVWKNTEDEILKAAVMKYGKNQWARISSLLVRKSAKQCKARWYEWLDPSIKKT
EWTREEDEKLLHLAKLMPTQWRTIAPIVGRTPSQCLERYEKLLDAACVKDDNYEPGDDPR
KLRPGEIDPNPESKPARPDPVDMDEDEKEMLSEARARLANTRGKKAKRKAREKQLEEARR
LASLQKRRELKAAGIDTRQRKRKRKGIDYNAEIPFEKKPPPGFYDVADEDRPVEQPQFPT
TIEELEGKRRIDVEAQLRKQDIAKNKIAQRQDAPSAILQANKLNDPETVRKRSKLMLPAP
QISDHELEEIAKMGYASDLAGSEELTEGSGATRALLANYSQTPRLGMTPQRTPQRTPSGK
GDTIMMEAENLARLRESQTPLLGGDNPELHPSDFSGVTPRKKEIQTPNLMLTPSATPGGA
GLTPRIGMTPTRDSFGMTPKGTPIRDELRINEEIDIHDSAKLEQRRNLQFGLGNLPQPKN
EYQIVMQPVPEDNEEPEEKIEEDMSDRLARERAEEEARQQALLRKRSKVLQRELPRPPAA
SLEFIRNSLTRADGDKSSFVPPTSVEQADEMVKKELLSVLEHDNAKYPLTEKVDKRKKKG
AKRSAGGPSASVPVIEDFEEDEMTEADSMIKEESQYLRVAMGHEEESLDEFVEAHKTCLN
DLMYLPTRGAYGLSSVAGNMEKLAALQNEFENVKKKMEDDIQKAASIESKVKVRTYGYEM
RAKDGLWPKIEETFKQMDTAAKELECFKALQKQEKLAASHRINNIWEEVQKQKELERNLQ
KRYGDLVVELERVQHRMDEYRAQAEKQEEIAAMNCDQELAEATENVTVLQATENPDPITA
SDELRSTVPGGASNGEATNLQMDGDKDIDAGKVHETVSRDVNLPDNMPSAVEGENDPNSQ
LTNSGVIYSSGVAAQDSVSIGDNVSDSSGVAAQDSVSIGDNVSDNLVATENKMVNDPDDG
VISDNMTRSVVAEDQKVEMRQNLTELEGSVQAAGDGGFANGSTTIVSVEGEVENSAENAA
TQI
NT seq 3072 nt   +upstreamnt  +downstreamnt
atgaggattatgatcaaaggaggtgtgtggaagaacaccgaggatgagatcctcaaggcg
gcggtcatgaaatacgggaagaaccagtgggctcgaatctcgtcgctcttggttcgcaaa
tcggctaagcagtgtaaggctcgctggtatgaatggctcgacccctccatcaaaaagact
gagtggactagagaagaggatgagaagcttcttcatcttgctaagctcatgcctacacaa
tggagaaccattgccccaattgttggtcgtacaccatcccaatgtctggagcggtatgag
aaactgcttgatgcagcctgcgttaaggacgacaactatgaaccaggtgatgatccacgg
aaattgcgccctggagagattgaccccaatcctgagtcaaagcctgctcgcccagatcct
gttgatatggatgaggatgagaaggagatgctttccgaggcacgagctcgattagcaaac
actaggggaaagaaggccaaaaggaaagccagggagaaacagcttgaagaggccagaagg
cttgcttcactacagaaaagaagagaattaaaagctgctggaattgatactaggcagcga
aagaggaaaaggaagggaatagactacaatgccgaaattccctttgagaagaagcctcct
ccaggcttttatgatgttgctgatgaagatagacctgtggaacagcctcagttccctacg
accattgaggaacttgaagggaaacgaaggattgatgtggaagcgcagttaagaaagcaa
gatattgcaaagaacaaaattgctcaaaggcaggatgctccctcagctattctacaagcc
aacaagttgaatgatccagaaacagttaggaagagatcaaaactgatgcttcctgcaccc
caaatttcagaccatgagctggaggaaattgcaaagatgggttatgcgagtgatcttgca
gggagtgaagaactcacagaagggagtggtgcaactcgagctcttcttgcaaactattcc
cagacaccaaggttgggaatgacacctcaaagaacacctcaaagaacaccttctggaaag
ggtgacactatcatgatggaagcagaaaatttggccaggttgagagagtctcaaacaccg
ttattaggaggagataatccagagttgcacccatcagatttttctggggtcactcctaga
aaaaaagaaattcaaacaccaaatctgatgctgactccttctgcaactcctggaggtgcg
ggtcttacacctagaattggcatgactccaacaagggattcttttggcatgactccaaag
gggactcccattagggatgagctccgtatcaatgaagaaattgatatacatgatagtgca
aaattggagcaacgaagaaacttgcaatttggtttaggcaatttaccacagcccaagaat
gagtaccagatagtcatgcaaccagttccagaagataatgaagaacccgaggagaaaatt
gaagaagacatgtctgataggctagctagagaaagagctgaggaagaagcacgccagcag
gcgttacttaggaagagatcaaaagtattgcagagggagctccccagaccaccagctgcc
tcattggaatttattagaaattccttgacaagagcagatggagataagagttcctttgtt
cctcctacttcagttgagcaggctgatgaaatggttaaaaaggaacttcttagtgtactg
gagcatgataatgccaagtatccacttactgagaaagtagacaaacggaaaaagaaaggt
gccaagcgcagtgctggtggacctagtgcttctgtccctgtgatagaagattttgaagaa
gatgaaatgacagaggctgattcaatgataaaggaagagtctcagtatcttcgtgttgca
atgggccacgaagaagaatcccttgatgaatttgttgaagcacacaaaacttgcctaaat
gatctcatgtacttacctactcgtggtgcttatggtctatcaagcgttgctggaaatatg
gagaaacttgcagcattgcagaatgaatttgagaatgtgaagaagaagatggaggatgat
atccagaaggcagcaagcattgagagcaaagttaaagttcgcacatatggttatgagatg
cgagctaaagatggtctttggccaaaaattgaggagacttttaagcagatggacactgct
gcaaaagaacttgaatgcttcaaagctttacagaagcaagaaaaattagcggcatcacac
cggataaataatatctgggaggaagttcagaaacaaaaggagctcgagcgaaatttacaa
aagcggtatggggatcttgtagtggagttggaaagggtacagcaccgtatggatgaatac
agagcacaagcagaaaaacaagaagaaattgcagccatgaattgtgatcaagagttggct
gaggccacagaaaatgtgactgttctgcaggcaactgagaatcctgatcctataactgct
tcagatgagcttaggagcactgttcctggtggtgcatctaatggtgaagctacaaatctg
caaatggatggtgataaggacattgatgctggaaaagttcacgagacagtgtccagggat
gttaatttacctgataacatgccttctgctgtggaaggagagaatgatccaaattctcag
ctcactaactcaggtgtaatatactccagtggggttgcagctcaagactctgttagcata
ggagataatgtttctgactccagtggggttgcagctcaagactctgttagcataggagat
aatgtttctgacaatctggttgcaactgaaaacaaaatggtaaatgatcctgatgatggg
gtaattagtgacaatatgacgaggagtgttgtagccgaggatcaaaaagttgagatgcgg
cagaacttgactgaacttgaaggcagtgttcaagcagcaggggatggtggttttgctaat
gggagtaccaccattgtttctgtcgaaggagaggtagagaattcagctgaaaacgcagca
acccaaatctaa

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