Prunus avium (sweet cherry): 110754287
Help
Entry
110754287 CDS
T05161
Name
(RefSeq) protein CHROMATIN REMODELING 20 isoform X1
KO
K10779
transcriptional regulator ATRX
Organism
pavi
Prunus avium (sweet cherry)
Brite
KEGG Orthology (KO) [BR:
pavi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pavi03000
]
110754287
03036 Chromosome and associated proteins [BR:
pavi03036
]
110754287
Transcription factors [BR:
pavi03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
110754287
Chromosome and associated proteins [BR:
pavi03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
110754287
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
ADD_ATRX
CTD2
N36
Motif
Other DBs
NCBI-GeneID:
110754287
NCBI-ProteinID:
XP_021811033
UniProt:
A0A6P5SB60
LinkDB
All DBs
Position
Unknown
AA seq
1466 aa
AA seq
DB search
MTQKLMKFRRPDKTTNCIQEPLSDKEIEELIAEFLEVESKAAEAQEALEKESLAKVESEV
REELAQTLHEDDLETAVADEMTILMEEWQAELDDLETESAHLLEQLDGAGIELPSLYKCI
ESQAPNGCCTEAWKRRIHWVGSQVTGEFTELRTDAERYLQAHRPVRRRHGKLLEDGASGF
LQKKLTIDGNKDAVTAEVDWCSLNKLFSDGATGDGASFGSKHWASVYLASTPQQAAEMGL
KFPGVNEVEEIDDIDGNSSDPFVAAAIANERELDLSEEQKKNYRKVKEEDDAYVDQKLQI
HLKRKRHQKRRKQDVGRKEVCPVDRVIESNMAQSPSMLDSATCISNGKIDEHGEIFSNND
DEGCQNMKSAVLEDLETSNNVDQESITSNGSSPVPDSSESRGSKRLNEDEELNIDNKRGR
TVIIDSDDDAPLKDISDCNLIKSEDQSNVDASICISATGGLPSHSLNKKVYCTACNKLAV
EVRSHPLLKVIICTDCRCLLDEKMHVKDPDCCECYCGWCGQSKDLVSCKSCKTLFCTTCI
KRNIGEECLSEAQTCGWRCCFCCPSLIQTLMLQLEKSIGSGDMVVSSSDSDSDNSDAELD
VAISSKRKRKKRIRRIIDDTELGEETKRKIAIEKERQERLKSLQVQFSAKSKMKSSASCN
GNLPEGANAEVLGDASAGYIVNVVREKGEEAVRIPPSISAKLKTHQITGVRFMWENIIQS
VRKVKAGDKGLGCILAHMMGLGKTFQVIAFLYTAMRSIDLGLKTALIVTPVNVLHNWRHE
FMKWRPSELKPLRVFMLEDVSRERRAEVLAKWRAKGGVFLIGYSAFRNLSLGKHVKDRHM
AREICDALQDGPDILVCDEAHVIKNTRADVTQALKQVKCQRRIALTGSPLQNNLMEYYCM
VDFVREGFLGSSHEFRNRFQNPIENGQHTNSTVDDVKIMNQRSHILYEQLKGFVQRMDMN
VAKKDLPPKTVFVIAVKLSPLQRKLYKRFLDVHGFANDKVYNEKIRKRSFFAGYQALAQI
WNHPGILQLRKDDRDYVRREDAIENFLADDSSSDENIDDSLVFGEKQRKINDILPGKKDD
DIFQKDWWNDLIHENNYKELDYSGKMVLLLDVLAMCSDVGDKALVFSQSIPTLDLIELYL
SRLPRHGKKWKFWKKGKDWYRLDGRTESSERQKLVERFNDPLNKRVKCTLISTRAGSLGI
NLHAANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEG
LAARVVDRQQVHRTISKEEMLHLFEFGDDENHELGQDKGCSDQNMTGEVEILPKHEVPLS
QGSCSSDKLMEGLLGKHYPRWIANFHEHETLLQENEEEKLSKEEQDMAWEVYRRALEWEE
VQRVPLNESAVDRKPAALNVASSAPEMSSLAELKAKDISVLRKCTNLSHLLTLRSQGTKI
GCTTVCGECGREICWKDLHRDGRLAR
NT seq
4401 nt
NT seq
+upstream
nt +downstream
nt
atgactcagaagttgatgaagtttcgacgtccggacaagacgacaaattgcatccaggaa
cctttatctgataaagaaattgaggagcttattgctgagtttttggaggttgagagtaag
gctgcggaagctcaagaagcacttgaaaaagagtctcttgccaaagtggagagtgaagtt
agagaggagttggcacaaactcttcatgaggatgatctggaaacagctgttgcagatgaa
atgactattttaatggaagagtggcaagctgagcttgatgacctcgagactgagagtgct
catttgttggaacaacttgatggggctggcattgagctaccaagcctttataagtgcatt
gaaagtcaggctcctaatggttgctgcactgaagcttggaaaagacggatacactgggta
ggatctcaagtgactggagaatttactgagttaaggaccgatgcagagaggtatctccaa
gcccacagacctgtaagaaggcgacatggtaaactattggaagatggcgctagtggattt
ctgcagaaaaagctaaccatagatggaaacaaggatgctgtgactgctgaagttgattgg
tgttctctcaacaaactattttctgatggtgcaactggggatggtgcttcatttggcagt
aagcactgggcttctgtttacttggccagtacgccacaacaagctgctgagatgggactc
aaattccctggtgtgaatgaggtggaggagattgatgatattgatggcaattctagtgat
ccatttgttgcagctgccattgcaaatgaaagagaactggatctgtctgaagaacaaaag
aaaaattataggaaggtcaaagaagaggatgatgcatatgttgatcagaagcttcaaatt
catttgaaacggaagagacatcaaaagagacgtaaacaggatgttggcaggaaggaagtt
tgcccagttgatcgggtgatagaaagcaacatggcccagtctccgtctatgctagactct
gctacctgtatctcaaatggtaaaattgatgaacatggtgaaattttttctaacaatgat
gatgagggatgccaaaatatgaagtctgctgtgcttgaagatttggaaacctctaataat
gtcgaccaagaaagcataacgagtaatggttcttctccggtgcctgattctagtgaatca
agaggctccaagcgtctgaatgaggatgaggaactaaacattgataataagaggggtcga
accgttataatagatagcgatgatgacgctccactgaaagatatttcagactgcaatttg
ataaaatctgaggaccagtccaatgtggacgcgagtatctgcatatctgccactggtggt
cttccttcacatagtctgaataagaaggtctactgcactgcttgtaataaacttgctgtc
gaagtgcgctcacatccacttctgaaggtgattatttgtacagattgcagatgcttattg
gacgaaaagatgcatgtgaaggatcctgattgctgtgagtgctattgtgggtggtgtggg
caaagcaaggaccttgtaagttgtaaatcctgcaagacattgttttgtacgacttgtata
aaaaggaatattggagaggaatgcttatccgaggcccagacctgtggctggcgatgttgt
ttctgttgcccaagtcttatacagacattgatgttacaattagagaaatcaataggttct
ggagatatggtagtttctagctctgatagtgattcagataattcagatgcagaactagat
gttgctatcagttctaagaggaagagaaagaagagaattcggaggatcattgatgatact
gaattaggagaagagaccaaaagaaaaattgcaattgaaaaggaacgtcaggaacgctta
aagtctttgcaagtacaattttcggccaaatctaagatgaagagctctgcaagctgtaat
gggaatttacccgaaggtgccaatgctgaagtgctgggtgatgcatcagctggatatata
gtgaatgttgtgagagagaaaggtgaagaagctgtcaggatccctccaagcatctcagca
aaactgaagacacatcagattacgggggtaagatttatgtgggagaatatcatacagtca
gtcagaaaagtgaaggctggggataaaggtcttggatgcattctagctcacatgatgggc
cttggtaaaacttttcaggtcatagcttttctgtacactgcaatgagaagtattgatttg
ggattgaaaactgcacttatagtcactcctgtgaatgtgctacataattggcggcacgag
ttcatgaaatggagaccttcagagctaaagcctcttcgcgttttcatgctagaagatgtg
tcaagggaaagaagagcagaggttcttgcaaagtggagagctaagggtggtgttttttta
attggctactctgcttttaggaacttatcccttggaaagcatgtgaaggatcgacacatg
gctcgagaaatttgtgatgccttgcaggatggacctgatatacttgtttgtgatgaggcc
catgttattaagaataccagggctgatgtaacccaagccttgaaacaagtgaaatgccaa
agaaggatagcattaactggatcacctctccagaacaatctcatggaatattattgtatg
gttgattttgtaagggaaggttttcttggaagcagccatgagtttaggaatcgcttccag
aatcccatagagaatggccaacatactaattcaaccgtggatgatgtgaaaatcatgaat
caaaggtctcatattctgtatgaacaattgaaaggatttgttcagagaatggacatgaat
gtggcgaagaaggacttgccaccaaaaactgtttttgtaatagctgttaagctctctccc
ttacagaggaaattatacaagagatttcttgatgtgcatggatttgctaatgacaaggtt
tacaatgaaaagataaggaagagaagttttttcgctggctaccaggccttagctcagata
tggaaccacccagggatcttgcaactaagaaaagatgacagagactatgtgagacgcgaa
gatgctattgagaattttcttgcagatgacagctctagtgatgaaaacattgacgatagt
ttggtttttggagagaagcagaggaagatcaatgatattttgccagggaaaaaggatgat
gacatttttcaaaaggattggtggaatgatcttattcatgagaataattataaagagctt
gattacagtggcaaaatggtattgctgcttgacgttctcgccatgtgttctgatgtgggc
gataaggcgttggtgtttagccagagcataccaacacttgacctcatagaactttacctt
tcaagactacctcgacatgggaagaaatggaagttttggaagaaaggaaaagattggtac
aggctagatggaagaacagagagctcagaaaggcaaaagttggttgagcgctttaatgat
cccctaaataagagggtgaaatgcactctgatttccaccagagctggatctttggggata
aatctccatgctgctaatcgtgtaatcatagttgatggttcttggaatccaacatacgat
cttcaggctatataccgtgcttggaggtatggccaaacaaagccggttttcgcttacaga
ttgatggcacatggaaccatggaagaaaaaatttataagcgtcaggtaacaaaggagggc
ctggctgcaagggttgttgatagacaacaggtacataggacaatatctaaggaagagatg
ttgcatctttttgaattcggtgatgatgagaaccatgagcttggccaagataaaggatgc
tcggaccaaaatatgactggtgaagttgaaattttgcctaaacacgaagtgcctctttct
caaggaagttgctcttctgacaagctaatggaaggtttacttggcaagcactatccaagg
tggattgccaatttccacgaacatgagacccttttgcaagagaatgaagaggaaaagctc
tcaaaggaggagcaagacatggcttgggaagtataccggagagcattggaatgggaggaa
gtgcagagagttcctctcaatgaatctgcagtcgaccgaaagccagctgcactaaatgtg
gcctcatctgcaccagagatgagcagccttgctgaattgaaagcgaaggatatttctgtg
ctgcggaaatgcactaatctttcacatttgctaaccctcagaagtcaggggacaaaaatt
ggttgcactactgtgtgtggggaatgtggtcgtgagatatgctggaaggatctgcatcga
gatggcaggcttgcaaggtga
DBGET
integrated database retrieval system
