Prunus avium (sweet cherry): 110754643
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Entry
110754643 CDS
T05161
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 32
KO
K14776
ATP-dependent RNA helicase DDX10/DBP4 [EC:
5.6.2.7
]
Organism
pavi
Prunus avium (sweet cherry)
Brite
KEGG Orthology (KO) [BR:
pavi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pavi03009
]
110754643
Enzymes [BR:
pavi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
110754643
Ribosome biogenesis [BR:
pavi03009
]
Eukaryotic type
90S particles
Helicases
110754643
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
TMPIT
Motif
Other DBs
NCBI-GeneID:
110754643
NCBI-ProteinID:
XP_021811435
UniProt:
A0A6P5S376
LinkDB
All DBs
Position
Unknown
AA seq
745 aa
AA seq
DB search
MRKPISKTSRKQKELSELQEIELLKSWIESQQPECGSNPMSLPPLPSDAPVGRVGPTIFS
RYAGATRFDQLPISKKTKDALRQSKYIEMTDIQRASLPHALCGRDILGAAKTGSGKTLAF
VIPLVEKLYRERWCPQDGVGSIILSPTREIASQTFDVLKAVGKHHNFSAGLLIGGRRDVE
AEKERVNELNILVCTPGRLLQHMDETPNFDCSQLQVLVLDEADRCLDSGFEATLNAIISQ
LPNRRQTFLFSATQTKSVQHLARLSLKDPEYLSVHEKSVTATPKNLQQMAIIVPLDQKLD
LLWSFIKTHLNSRILVFLSTRKQVKFVFEAFKKLRPGTPLKCLHGKMKQEGRMGTYSQFT
EKHSVLFSTDVASRGLDFNKAVDWVVQVDCPEDVASYIHRVGRTARYDSSGRSVLFLTPS
EEKMLDKLQAAKIPIKKLKHNEGRMQPVSGLLAALLVKYPDTLQGLAKRAFITYLKSVHN
QKDKEIFDVMKLPIDEFSASIGLPMTPKIRFLSTKIKSKKMSKLSPIVEPEILDKEHELE
LPKEELDIGDFKEEGEKDALLTNDRENEAEEEGRKIGDLILATRISKKKKLKININRPVG
TRVVFDEEGNTLLPLAKLADTKNVSGLLDQIEDKKTEYYKKLREDLKKVDKEDKDLDRQR
RREKRMKDKMKQKRGNIEEEEDGDLSDSEGEPSEDRPHKRSKIYFDSDDEGEREESKDKL
GFKPDSVSLAEQEALALKLLSSMHS
NT seq
2238 nt
NT seq
+upstream
nt +downstream
nt
atgagaaaacccatatcaaagacctcccgcaagcaaaaggaactttcggagctccaagaa
atcgagcttctgaaatcatggattgaatcccagcaacccgaatgtggctccaaccccatg
tctcttcctcctttgccctccgacgcccccgtcggccgcgtcggccccacaatcttctcg
cgctacgctggtgccaccaggttcgaccagttgcccatctctaagaagaccaaggacgcc
ttacgccaatccaagtacatcgaaatgaccgatattcagagggcgtctttgccccacgct
ctatgtggcagagatattcttggtgccgccaagactggctcgggaaagactctggctttt
gttataccgcttgtggaaaaattgtatagagagagatggtgtcctcaggatggggtaggc
agcatcatactatctccaacaagggaaatagctagtcaaacttttgatgtgttaaaagcg
gttgggaagcaccataattttagtgctggcctcctaattggtggtcgcagagatgttgaa
gcagagaaggagcgcgtaaatgagctgaacatactggtttgcactcctggccggcttctt
cagcacatggatgaaactccaaattttgattgttcacagcttcaggttttggtccttgat
gaggcagaccgttgtcttgattcgggatttgaggcgacgctgaatgcaatcatttcacag
ctacccaacagaagacaaacctttctgttctcagcaactcaaacaaagtcggttcaacat
cttgcaagactcagtttgaaggatccagagtatctcagtgtgcatgagaagtctgtgaca
gccactcctaagaatttgcagcaaatggcaatcatcgttcctcttgaccaaaagttagac
ctgctgtggagcttcataaagacacacctaaattctagaattttagtgtttctatcaacc
cgaaaacaggtaaaatttgtctttgaagcatttaagaagctccgtcctggaacacccttg
aagtgtcttcatggtaagatgaagcaagagggacgaatgggaacatactcacagtttact
gaaaagcattcagttctcttctcgactgatgtggcttcaagaggccttgatttcaacaag
gcagtcgactgggttgttcaggtggattgtccagaagatgttgcatcttacatacataga
gttggccgaactgctcgctatgattcttctgggcgatcagttttattcctgacgccttca
gaagaaaaaatgcttgataaattacaagcagcaaaaatacccataaagaaattaaagcat
aacgagggacgaatgcaacctgtgtctgggttgttagcagctttgctagtcaagtacccg
gatacgcttcagggtctggctaaaagggcctttatcacgtatctgaagtcggttcacaat
cagaaggacaaagagatttttgatgttatgaaactaccaattgatgaattttcagcatca
ataggtctaccaatgacccccaaaatccgttttttaagcacgaaaatcaagtcaaagaaa
atgtccaaactatcacccattgttgaaccagaaattttggacaaggaacatgaattggag
cttcctaaagaggagcttgatattggtgattttaaggaagagggggagaaagatgctctt
ctaacaaatgatagagaaaatgaggcagaggaggaaggaagaaaaattggagatcttata
ctggcaactcggatttcgaagaagaagaagttaaagatcaatatcaataggccagtggga
actagagtcgtctttgacgaggaaggcaacacgctactgccactagcgaagctggctgac
accaaaaatgtcagtggcctgcttgatcagattgaagacaagaaaaccgaatattataag
aagcttagagaagatttgaagaaggtggacaaggaagacaaagatttggaccgccagcgt
cgccgtgaaaaacgaatgaaggataagatgaagcagaagagaggaaatatagaagaagag
gaggatggtgatctttctgattcagaaggagagccatctgaggatcgaccccacaagagg
tcaaagatatactttgatagtgatgatgagggtgagagagaagaaagtaaggataaactg
gggttcaagcccgactcagtatctttagcggaacaagaagctttggctctcaaattgttg
agttccatgcactcataa
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