Prunus avium (sweet cherry): 110755093
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Entry
110755093 CDS
T05161
Name
(RefSeq) SWI/SNF complex subunit SWI3B
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
pavi
Prunus avium (sweet cherry)
Pathway
pavi03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
pavi00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
110755093
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pavi03021
]
110755093
03036 Chromosome and associated proteins [BR:
pavi03036
]
110755093
Transcription machinery [BR:
pavi03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
110755093
Chromosome and associated proteins [BR:
pavi03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
110755093
PBAF complex
110755093
GBAF(ncBAF) complex
110755093
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIRM
Myb_DNA-binding
SWIRM-assoc_1
Myb_DNA-bind_6
Methyltransf_30
NAC
Motif
Other DBs
NCBI-GeneID:
110755093
NCBI-ProteinID:
XP_021811946
UniProt:
A0A6P5SEI5
LinkDB
All DBs
Position
Unknown
AA seq
474 aa
AA seq
DB search
MTTKSVVQDFSSDTPCRPNPSPISVKPETPATPRPPQPPANSDVHIVHVPSYSRWFSWDH
IHHCEVQFLPEFFDSHSPSKNPRLYMYYRNNIIKQYRDNPARKLTFTDARKTLVGDVGSI
RRVFDFLEVWGLINYSSALNKPLRWEDKDSKAASPVAESPTGCPKDSSTPNKESPKKRVC
HGCKSLCSIACFVSEKYDMTLCARCYVRGNYQIGVTSSDFRRVEINEETRSDWAYKDTLH
LLEALMHYGDDWRKVAQHVGRSEKECITHFIKIPFGEEFIADFHSGNFKDSVDSESGMES
NGTPFPSKRMRLTPLADASNPIMAQAAFLSALAGVEVAKAAACAAVTTLCEADYETSRLS
LGSRAWNARQHEANDESNGDTNLDELGGAFVDANSQLEKEGMDVERAISGITEVQMKEIQ
EKIVHFEELDLQMEKERQKLEQLKNMLFVDKLTLSIHKTCAQKTEGMEKNIQTD
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgacgaccaaatcagtagtccaagacttctcatctgacactccatgccgacccaatcct
tctccaatctctgtcaagcccgagactccagccactccacgccctcctcaaccacctgct
aactcagacgttcatatcgtacatgtacctagctattccaggtggttctcatgggaccat
atccaccattgtgaagttcaattcctcccagagttcttcgattctcactcaccttccaag
aatcctaggctttacatgtactatcgcaacaacatcatcaagcagtacagggacaaccct
gcccgaaagctcaccttcactgatgcccgtaagactctcgttggtgatgttggctccatt
cgcagggtttttgattttcttgaggtttggggtttgatcaattactcctccgcgctcaac
aagccccttaggtgggaggacaaggacagcaaggctgcctctccggtcgctgaatccccc
acaggttgtcctaaggactcttccactcccaacaaggagagccccaagaagagagtgtgc
catggttgcaagtctctttgtagcattgcctgctttgtttctgaaaagtatgacatgact
ctctgtgcaaggtgctatgttcgcgggaattatcagattggtgtaacttcttcagatttc
aggagggttgagatcaatgaagagacgaggagtgattgggcatataaagatactttgcat
cttctagaagctctcatgcattatggtgacgattggaggaaggtagcacaacatgtcggt
cggagtgagaaggaatgcatcactcatttcattaaaattcctttcggtgaagaatttatt
gctgatttccattctgggaatttcaaagactctgtagattccgaatctggaatggagagt
aatggtacaccattcccaagtaaaagaatgcgtctcacacctcttgcagacgcaagcaac
ccaataatggctcaggcagccttcctgtcagctttggcaggtgtagaggttgcaaaagct
gctgcttgtgctgctgtaacaaccctttgtgaggcggattatgaaacaagtagactgagt
ctaggatctcgggcttggaatgcaagacagcatgaagcgaatgatgaatccaatggggac
accaacctagatgaactgggaggtgcttttgtagatgcaaattcacagctcgaaaaggaa
gggatggatgtggagagagcaatttctgggattacagaggtgcagatgaaagagattcaa
gagaagattgttcattttgaggagttagatttacagatggagaaagaacggcaaaaactg
gagcaactgaaaaacatgctctttgttgataagctaacactttcaattcataaaacttgt
gcacaaaaaactgaaggaatggagaagaatatacaaacagattga
DBGET
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