KEGG   Prunus avium (sweet cherry): 110755385
Entry
110755385         CDS       T05161                                 
Name
(RefSeq) chromatin structure-remodeling complex protein BSH isoform X1
  KO
K11648  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
Organism
pavi  Prunus avium (sweet cherry)
Pathway
pavi03082  ATP-dependent chromatin remodeling
pavi03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:pavi00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    110755385
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    110755385
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:pavi01009]
    110755385
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pavi03021]
    110755385
   03036 Chromosome and associated proteins [BR:pavi03036]
    110755385
Protein phosphatases and associated proteins [BR:pavi01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     110755385
Transcription machinery [BR:pavi03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    BAF/PBAF complex
     110755385
    SWI/SNF complex
     110755385
Chromosome and associated proteins [BR:pavi03036]
 Eukaryotic type
  Chromatin remodeling factors
   BAF complex
    110755385
   PBAF complex
    110755385
   SWI/SNF complex
    110755385
SSDB
Motif
Pfam: SNF5
Other DBs
NCBI-GeneID: 110755385
NCBI-ProteinID: XP_021812265
UniProt: A0A6P5S5L2
LinkDB
Position
Unknown
AA seq 269 aa
MKGQASSSYKGAVKFRMPTAQNLVPIRLDLDVDGQKFKDTFTWNPSDPDSEIVVFARRTA
KDLKLPPGFITVMASAIQSQIADFRSLEGQDMYPGERIVPIKLDLRVNHTLIRDQFLWVS
FNSRLFHLIFSIPPALTLGFIRFEGFQDLNNFESDPEEFAKTFCADLGIQDPEVGPAIAF
SIREQLYEIAVQSVASARENRISKKGRRGAEYTPVSKAGSTGLDLVKLFGHKSSVVRKRK
EWDVYEPIVDLLSSEEVDALQAKEERLTR
NT seq 810 nt   +upstreamnt  +downstreamnt
atgaaaggtcaggcgtcgagttcctacaaaggcgctgtcaagtttaggatgccaacagcc
cagaatttagtaccgattcgcttggacctcgatgtcgatggccaaaagttcaaagacact
ttcacttggaacccatctgaccctgactcagagattgtggtgtttgcgagaaggacagca
aaagacttgaagcttcctccgggtttcattacagtcatggcttctgccattcagtcacag
attgcagactttcggtcgttggaaggccaagatatgtacccgggcgagaggattgtgcca
attaagcttgatcttcgagtgaaccatactctcattagggaccagtttttatgggtgagc
ttcaacagtcgtttgtttcatcttatcttttcaatacctcctgctcttacacttgggttc
attcgtttcgagggatttcaggacttgaacaactttgaaagtgatcctgaagagtttgct
aaaacattctgcgcagatttaggtattcaagatcctgaagtggggcctgcaattgccttt
tcaattagggaacaactgtatgagattgcagtgcaaagtgtagcatcagcaagagaaaac
agaataagcaaaaagggacgccgaggggctgagtatactccagtcagtaaagcaggtagt
actggattggacctggtgaagttattcggtcacaaatctagtgttgttcggaaaagaaag
gagtgggatgtatacgaacccattgttgatcttctatctagcgaggaagtggatgccctt
caagcaaaagaagaaaggcttactcggtga

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