Prunus avium (sweet cherry): 110755420
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Entry
110755420 CDS
T05161
Name
(RefSeq) ruBisCO large subunit-binding protein subunit alpha
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
pavi
Prunus avium (sweet cherry)
Pathway
pavi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pavi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
110755420
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pavi03019
]
110755420
03110 Chaperones and folding catalysts [BR:
pavi03110
]
110755420
03029 Mitochondrial biogenesis [BR:
pavi03029
]
110755420
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pavi04147
]
110755420
Enzymes [BR:
pavi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
110755420
Messenger RNA biogenesis [BR:
pavi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
110755420
Chaperones and folding catalysts [BR:
pavi03110
]
Heat shock proteins
HSP60 / Chaperonin
110755420
Mitochondrial biogenesis [BR:
pavi03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
110755420
Exosome [BR:
pavi04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
110755420
Exosomal proteins of other body fluids (saliva and urine)
110755420
Exosomal proteins of breast cancer cells
110755420
Exosomal proteins of colorectal cancer cells
110755420
Exosomal proteins of bladder cancer cells
110755420
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cpn60_TCP1
gpW
Motif
Other DBs
NCBI-GeneID:
110755420
NCBI-ProteinID:
XP_021812307
UniProt:
A0A6P5SD54
LinkDB
All DBs
Position
Unknown
AA seq
585 aa
AA seq
DB search
MASANALTSASVLCSPSQSLRRRVNQQQNNRVNYKQSRGRFVVKAAAKDIAFDQNSRRAL
QAGIDKLADAVGLTLGPRGRNVVLDEYGSPKVVNDGVTIARAIELPDAMENAGAALIREV
ASKTNDSAGDGTTTASILAREIIKLGLLSVTSGANPVSIKKGIDKTVHGLIEELENKSRP
VKGRDDVKAVASISAGNDEYIGTMIADAIDKVGPDGVLSIESSSSFETTVEVEEGMEIDR
GYISPQFVTNLEKLIVEFENARVLITDQKISAIKDIIPLLEKTTQLRAPLLIIAEDVSGE
ALATLVVNKLRGIINVAAIKAPSFGERRKALLQDIAILTGAEFQASDLGLLVENTSVEQL
GLARKVTISKDSTTIIADAASKDELQARIAQLKKELSETDSVYDSEKLAERIAKLSGGVA
VIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSMYVPALKQKLVDAD
EQLGADIVQKALVSPAALIAQNAGIEGEVVVEKIKDSEWEIGYNAMTDKYENLVEAGVID
PAKVTRCALQNAASVAGMVLTTQAIVVEKPKPKSPAAAAAQGLTV
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcggccaacgctcttacttcagcttccgttctctgctcgcccagtcagagtttg
aggaggagggtgaatcagcagcaaaataatagggtgaattacaagcaatcaaggggccga
tttgttgtgaaggctgctgcaaaagatatagcttttgaccagaactcaaggcgtgcgcta
caggccggaattgataagcttgctgatgcagttggccttactcttggccctagggggagg
aacgttgtcttggacgaatatggaagtcccaaagtggtgaatgacggagtaacaattgct
agagctattgagcttcccgatgctatggaaaatgctggtgcagctctcattagggaggtt
gctagcaaaacgaacgactcagctggtgatggaacaacaacagcatcaattcttgctcgg
gagataatcaagctcggacttttgagtgtcacctctggtgcaaatcctgtttcaataaag
aaggggattgataaaactgtacatggtctgatagaggagctagagaataaatctaggcct
gttaagggtcgtgatgatgttaaagctgttgcttctatttctgctgggaacgatgagtat
attgggacaatgattgctgatgctattgacaaggtgggacctgatggtgtcctatccatt
gagtcatcatcctcatttgagacaaccgtcgaagtagaagaaggaatggagattgacaga
ggatatatctcccctcaattcgttacaaaccttgagaaattgattgttgaatttgagaat
gcaagagttttgattaccgaccagaaaatttcagctatcaaggacataattcctcttttg
gagaagaccactcagttgagagcccctctgcttataattgctgaggatgtctctggggag
gctttggcgactcttgttgtgaacaagttgaggggcataattaatgttgctgccatcaaa
gctcctagttttggtgaacggagaaaggctctcctccaagatatcgccattttaacagga
gctgagtttcaagccagtgatctgggtctactagtggagaacacctcagttgagcagctt
ggtttggcccgaaaggtgacaatatcaaaggactccactaccatcattgctgatgcagca
tcaaaagatgagttgcaagctaggattgcacagctgaagaaggagttatctgagacagat
tctgtttatgactcagaaaaattggctgagcggattgctaaattatcaggtggagttgct
gttataaaggtgggagctgctacagagaccgaacttgaggaccgtaagcttcgtattgag
gatgccaagaatgccacttttgctgccatagaggaaggtattgtgcctggtggtggtgcc
gccttggtgcatctgtcaatgtatgtccctgcactcaagcaaaaacttgtagatgcagat
gagcagctaggtgctgacattgtgcagaaggcactggtatcaccagcagcattaatagct
caaaatgctggaattgaaggtgaagtggttgtggagaaaataaaggatagtgaatgggag
atcggttacaacgcgatgacagacaagtatgagaacttggtggaagccggtgttattgac
ccagcaaaggtaacaagatgtgctttacagaatgcagcttcagttgccggaatggtgttg
accacccaagccattgtggtggaaaagcctaagcccaagtcacctgccgctgctgctgca
caaggtcttactgtgtaa
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