Prunus avium (sweet cherry): 110755475
Help
Entry
110755475 CDS
T05161
Name
(RefSeq) U3 snoRNP-associated protein-like EMB2271
KO
K14793
ribosomal RNA-processing protein 9
Organism
pavi
Prunus avium (sweet cherry)
Brite
KEGG Orthology (KO) [BR:
pavi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pavi03009
]
110755475
Ribosome biogenesis [BR:
pavi03009
]
Eukaryotic type
90S particles
Other 90S particles
110755475
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
WD40_CDC20-Fz
WDR55
Beta-prop_EML_2
Beta-prop_EML
EIF3I
Beta-prop_TEP1_C
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR75_1st
NBCH_WD40
Beta-prop_SCAP
Beta-prop_SPT8
WD40_MABP1-WDR62_1st
Beta-prop_DCAF12
Beta-prop_IFT140_1st
ANAPC4_WD40
Beta-prop_IP5PC_F
WDR90_beta-prop_4th
Beta-prop_DCAF4
Beta-prop_IFT122_1st
SMC_ScpA
Beta-prop_WDR19_1st
Motif
Other DBs
NCBI-GeneID:
110755475
NCBI-ProteinID:
XP_021812379
UniProt:
A0A6P5S960
LinkDB
All DBs
Position
Unknown
AA seq
523 aa
AA seq
DB search
MKNKKKGGSAPKGPKGAKKSKTYSLNEDSFFSTESKKRRKIDRDEIESDSDDDYGVVGSD
GEGGGEEAEEAEAIEETADEKRKRIAQEYLEKVRGLARREKEDEEDESDEEGEKEGERDS
LVAKILQQQQLEDSGRVRRAIASRVQKPESTDEFRISVKHRQSVTAVALSEDDFKGFSAS
KDGTILHWDVDSGKSERYLWPRDEVLKSHGVKDPQGRATKHSKHVLALAVSSDGRYLASG
GLDRHIHLWDTRTREHIQAFPGHRGPVSCLTFRQGASELFSGSYDRTVKIWNVEDRAYID
TLFGHQGEVLSIDCLRKERVLSVGHDRSMQLFKVPEASRLVFRAPASSLECCCFISNDDF
LSGSDDGSVELWSMLRKKPVCIVKNAHPCLAARKNVEQKDGDRIPNGHIENGDHTSQSYD
CSSTYSWISSVTVCRGSDLAASGAGNGSVRLWAVESESKAMKPLHDLPLVGFVNSLAFAK
SGGFLVAGVGKEPRLGRWGHISSARNGIAIHPLKLSSEDTDNF
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atgaagaacaagaagaaaggaggctcagctcccaagggacctaagggagccaaaaagagc
aagacttactctctcaatgaagactcgttttttagcactgaatcgaagaaacgccgaaaa
atcgaccgtgatgagatagagagcgattcagacgacgactatggcgtcgttgggtcggat
ggcgagggcggtggagaggaagctgaggaggctgaggctatagaagaaactgcagatgag
aagaggaagaggatagcgcaagagtacttggagaaggttcgaggattagcgaggagggag
aaggaagatgaggaggatgagagtgatgaagaaggtgagaaggaaggcgagagagactcg
cttgttgccaagattttgcagcagcagcagctcgaggacagtggccgagttcgccgtgcc
attgcttctagggttcaaaagcctgaatctactgatgaatttcggatctcagtgaagcat
cgacaatctgttactgctgtggctctgtccgaggatgacttcaagggcttctcagcttct
aaggatggcaccattcttcactgggatgtagatagtgggaaaagtgaaaggtatctatgg
ccccgtgatgaagtattaaagtctcatggggttaaggatccacaaggtcgagctacaaag
catagtaaacatgtgttagctctagcagttagctccgatggtcggtatttggcaagtgga
ggcttagatcgccatattcatttgtgggatactcgtacacgagagcatattcaggctttt
ccaggtcatagaggccccgtttcatgtttaactttcaggcaaggggcatcggaacttttt
tctggttcatatgatcgaacagttaagatatggaatgttgaagatagagcttacatagat
acattatttggtcaccaaggagaagtattaagtattgattgcctacgaaaagaacgggtt
ttgtctgttggacacgatcgaagcatgcagttatttaaggttccagaggcgtcacgttta
gtattccgtgcccctgcatcttctttggaatgttgttgttttattagcaatgatgacttc
ttatccggctctgatgatggaagtgttgagctttggagcatgctgcgaaagaagcctgtt
tgcatagttaagaatgctcatccttgtttggctgcacgcaaaaatgtagaacagaaggat
ggtgatagaattccgaatggtcacatagaaaatggtgaccacacttctcaaagttatgat
tgttcatcaacatattcttggatcagttcagtcactgtttgcagaggcagtgaccttgct
gcatcaggagctggtaatggctctgttcgtttatgggctgttgaaagtgagagcaaagcc
atgaagcccttacacgacctcccattggttggatttgtgaattctttagcttttgcaaaa
tctggaggatttctagttgcaggagttgggaaggaacctcgactaggaaggtggggacac
atctcatctgctcggaatggaattgcaatccatccccttaagctttcatcagaagataca
gataatttttag
DBGET
integrated database retrieval system
