Prunus avium (sweet cherry): 110755517
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Entry
110755517 CDS
T05161
Name
(RefSeq) protein BREAST CANCER SUSCEPTIBILITY 1 homolog
KO
K10683
BRCA1-associated RING domain protein 1
Organism
pavi
Prunus avium (sweet cherry)
Pathway
pavi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pavi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
110755517
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pavi03019
]
110755517
04121 Ubiquitin system [BR:
pavi04121
]
110755517
03036 Chromosome and associated proteins [BR:
pavi03036
]
110755517
03400 DNA repair and recombination proteins [BR:
pavi03400
]
110755517
Messenger RNA biogenesis [BR:
pavi03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
110755517
Ubiquitin system [BR:
pavi04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
110755517
Chromosome and associated proteins [BR:
pavi03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
110755517
DNA repair and recombination proteins [BR:
pavi03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
110755517
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BRCT
BRCT_2
zf-C3HC4_2
zf-HC5HC2H
zf-C3HC4
zf-RING_2
zf-RING_UBOX
zf-C3HC4_4
zf-C3HC4_3
zf-HC5HC2H_2
zf-RING_6
zf-RING_5
zf-RING_10
zf-rbx1
RTT107_BRCT_5
PHD_NSD
PTCB-BRCT
zf-Nse
Motif
Other DBs
NCBI-GeneID:
110755517
NCBI-ProteinID:
XP_021812432
UniProt:
A0A6P5SDI8
LinkDB
All DBs
Position
Unknown
AA seq
1026 aa
AA seq
DB search
METPAHLEKMGRELKCPICLSLLNSAVSLNCNHVFCNSCIVKSMKSGSNCPVCKIPYRRR
EIRPAPHMDNLVSIYKSMEVASGINIFVTQNAPSTKSSDGKPQDKDDCHDEQDISKHCQD
RDEKQKSLRGKGSRKTKSNLKNSGSLSVKPSFPTKKRVQVPQCPLSETPTRPEKTVGKLM
DERSKHSSTTLKEKPVLNEVGEPMLSPFFWLRDKDEENLSQHTDGDQLTDSPPNVPTFSD
IKDSDDEYSARLTPPGEVHGKSSNVADLFDSEMFEWTQRECSPELFRSPSKMQVADNDDI
DRVQVKELKEISKNKKLDEAHSAKSARSRNSRQSSGNLYFLPDIPPAGTKDDSQVVSNEL
NKQGRQTRNISKRKCATSHTDPGADVSVNVNSKGSKVFYEEPVCKNNSSSLAKTSKRSKK
EHPSVVAMNPTSENVHVLSTEAETQNNGDDKGITESPASLGKSEGGSAPPTKKAGKICKE
VNAKSQMHCPVGSRKQKMVSMPNKMLEEVSEVQKQANKDTTTESSLINLSTVDNKKASEF
RNKSRKLPRETKLCDRELKNNKKAKISSDGNLKDDTFVRVGEGHGNVNENGNQPTEKIEG
NCDITTDRSPAQKLPSLTNNLVLQRCEAIPSKIQCAFCLSSEESEASGEIVHYYNGKPVA
ADHNGGLKVIHAHRICTEWAPNVYFEDDTAVNLEAELTRSRRIKCSCCEIKGAALGCYER
SCRKSFHVTCAKLMPQCRWDTDNFVMLCPLHASSKLPNESSESQARRRKSNPRKQSNAEH
YKAAVKQDYNAPPDRKFCGSSKKLVLCCSSLTNAERESVSGFERLSGLTVLKNWDSSVTH
VIASVDENGACRRTLKVLMGILEGRWILSMEWINACTEAMKLVNEEPYEINVDIYGIRDG
PRLGRLRLQNKQPKLFDGFKFYFMGDFVPSYKGYLQDLVIAAGGTILHRKPVPEGQKAFS
ASSPKCQTFIIYSLEQPEQGHPSKGMILDRRQSDAKALASSAGAKAASNSWILNSIAACK
LQSFSE
NT seq
3081 nt
NT seq
+upstream
nt +downstream
nt
atggagactccggcccacctcgagaaaatgggcagagagctcaagtgccccatttgtttg
agtctgctgaattctgcggtttcacttaattgcaatcatgtcttctgcaactcttgtatt
gtgaaatcaatgaaatcgggttccaattgtcccgtttgtaaaattccgtatcggcgcaga
gagattcgtcctgctccacacatggataatttggttagtatttacaaaagcatggaggtt
gcttcaggaattaatatatttgtcactcagaatgcaccctcaactaaatcatcagatgga
aaaccgcaagacaaagatgattgtcatgatgagcaagatatctctaaacattgtcaggat
agagatgagaaacagaaatccttaagaggaaaaggatcaaggaaaactaaatccaacctg
aaaaattcgggttctctttcagttaaaccttcatttccaaccaagaaaagggttcaggtt
ccacagtgtcctctttcagaaactcctacacgccctgaaaagacagttggtaaactaatg
gatgaaaggtctaagcacagttcaacaactttaaaggagaagccagttctaaatgaagtg
ggagaaccgatgctttcacctttcttttggttgagagacaaggatgaagaaaatttgagt
cagcatactgatggtgatcaactcacagatagtcctccaaatgttcctactttcagtgat
atcaaagactcagatgatgaatactctgctagattgaccccaccgggcgaagtgcatgga
aaatcttcaaatgttgcagatttatttgatagtgagatgtttgaatggacacaaagagaa
tgctcccctgaactcttccgaagtccttctaagatgcaggttgcagacaatgatgatatt
gatagagttcaagtgaaggaactgaaagaaatctcaaaaaacaagaaattagatgaagca
cattctgctaaaagtgcaaggtctagaaattctagacaaagtagtggaaatttgtatttt
ctgccagatattccccctgctggaacaaaagacgatagtcaagttgttagtaatgaattg
aacaagcaaggtaggcagacaaggaatataagtaaaagaaagtgcgctacaagtcataca
gatccaggtgctgatgttagtgttaatgttaattcaaaaggatctaaagtattttatgaa
gaaccagtatgtaagaataattctagttctttggccaagacttccaaaaggagtaagaag
gaacatccatctgtggttgcaatgaatccaacatctgaaaatgttcatgtcctctccaca
gaagctgaaactcaaaataatggtgatgacaaggggataactgaatcacctgcttcatta
ggaaagagtgaaggtggtagtgcaccacccactaagaaggctggaaaaatctgtaaggag
gtaaatgccaagagccagatgcactgcccagtagggtcaagaaagcaaaagatggtctct
atgccaaacaaaatgcttgaggaggtatcagaagtacagaagcaggcaaataaggatact
acaactgagtcgtctcttataaatctctctacagttgataacaagaaagcctctgagttc
aggaacaaatccagaaaacttccgagggaaaccaagttatgtgatcgagaattgaagaat
aacaaaaaggcgaaaatttcctctgatggcaacttaaaagatgatacttttgttagggtt
ggagagggtcatgggaatgttaatgaaaatggaaatcaacccactgaaaagatcgaaggc
aattgtgatatcacaactgatcgatcaccagcgcagaagcttccttcattgacaaacaat
ttggtcttgcagagatgtgaggccattcctagtaaaatccaatgtgctttctgtctttca
tcagaagaatcagaggcgtctggagagatagtccactattataatggcaagcctgttgct
gcggatcacaatggaggactcaaggttattcatgcacacaggatctgcactgaatgggct
cccaatgtctattttgaagatgatactgctgttaatcttgaagctgagttgactaggagt
cgtagaattaaatgttcttgctgtgaaattaaaggagcagctcttggttgttatgagagg
agttgtcgtaagagctttcatgtcacctgtgcaaagttgatgcctcagtgtcgatgggat
actgataattttgttatgttatgcccccttcatgcctcttctaaattgccaaatgaaagc
tctgaatctcaagcaaggaggaggaagagcaatcctagaaaacaatctaatgctgaacat
tataaagctgctgttaaacaagactacaacgcccctccagatcggaaattttgtggatca
tccaagaaattagttctctgttgttcatctctcacaaatgcagagagggaatctgtttct
ggatttgaaagattatctggacttacagttttaaagaattgggattctagtgtcacccat
gttattgcgtcagtagatgaaaatggagcatgtagaagaaccctcaaagttttgatgggt
atcttggaggggaggtggatcctgagtatggaatggattaatgcttgcacagaagcaatg
aaactagttaatgaggagccttatgaaattaacgtcgacatttatggaatcagggatggt
cctcgactcggtagactaagacttcagaacaagcaaccaaaactttttgatgggttcaag
ttttactttatgggagactttgtaccttcatataagggttatctacaagacctagtaata
gctgctggaggaactattctgcatagaaagcctgttccggagggccagaaagccttttca
gccagttccccaaaatgtcaaaccttcataatttacagccttgagcaacccgagcagggt
catcctagcaagggtatgatattggaccgcaggcagtctgacgcaaaggctttggccagt
tctgctggagccaaggcagcaagcaattcatggattttgaactccattgctgcctgcaag
ttacaaagtttttctgaataa
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