Prunus avium (sweet cherry): 110755528
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Entry
110755528 CDS
T05161
Name
(RefSeq) protein RAE1-like
KO
K14298
mRNA export factor
Organism
pavi
Prunus avium (sweet cherry)
Pathway
pavi03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pavi00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
110755528
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pavi03019
]
110755528
03036 Chromosome and associated proteins [BR:
pavi03036
]
110755528
Messenger RNA biogenesis [BR:
pavi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
110755528
Chromosome and associated proteins [BR:
pavi03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
110755528
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
WD40
WD40_Prp19
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
WDR55
Beta-prop_WDR3_2nd
Beta-prop_RIG_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_2nd
Beta-prop_EML
WD40_Gbeta
EIF3I
ANAPC4_WD40
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_C
Beta-prop_DCAF12
Beta-prop_Aladin
Beta-prop_ACSF4
Beta-prop_HPS5
Beta-prop_SPT8
Beta-prop_EIPR1
Beta-prop_IFT122_1st
WD40_MABP1-WDR62_2nd
WD40_RFWD3
Beta-prop_WDR75_1st
Beta-prop_WDR19_1st
WDR90_beta-prop_4th
Beta-prop_BBS7
Motif
Other DBs
NCBI-GeneID:
110755528
NCBI-ProteinID:
XP_021812449
UniProt:
A0A6P5S9C5
LinkDB
All DBs
Position
Unknown
AA seq
351 aa
AA seq
DB search
MSSFMAAANVNSNSNPNPNKSFEVAQPPNDSISSLSFSPKSNILVATSWDNQVRCWEILQ
SGTNLASQPKAAISHDHPVLCSTWKEDGTTVFSGGCDKQVKMWPLGGQPVTVAMHDSPIK
EIAWIPEMSLLVTGSWDKTMKYWDVRQPNPVHTQQLPERCYALSVRYPLMVVGTADRNLI
VFNLQNPQTEFKRILSPLKYQTRCVAAFPDQQGFLVGSIEGRVGVHHLDEQQQNKNFTFK
CHREGSEIYSVNSLNFHPVHHTFATAGSDGSFNFWDKDSKQRLKAMSRCNQPIPCSTFNN
DGSIFAYAVCYDWSKGAENHNPANAKNYIFLHVPQEAEVKSKPRVNTGGKR
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagtttcatggctgctgcaaatgtaaattcgaattcaaatccaaatccaaacaag
tcctttgaggtcgctcaacctccaaacgactccatatcaagcctaagtttcagtccaaag
agcaacattctggtcgccacctcctgggacaaccaggtgcgatgctgggagatactccag
agcggaacaaatcttgccagtcagcccaaggcagcgatatcccatgaccatccggttttg
tgctcaacttggaaagaggatggaacgaccgtgttctctggaggttgcgacaagcaagtt
aagatgtggcctttgggtggccagccagtaactgttgccatgcatgattcacccattaaa
gagattgcttggatccctgagatgagcctcttagtcacaggaagctgggacaagactatg
aagtattgggatgtgaggcagccaaatccagtgcatacccaacaactacctgagcgctgt
tatgctttatcggtgagataccctctaatggttgttggcacagcagacagaaatctgatt
gtttttaacttgcagaatccacagactgaattcaagagaattctttcgcccctcaagtat
caaacaaggtgtgttgctgcatttcctgatcagcaaggattcttggttggctctattgaa
gggagggttggcgtacatcatctggatgaacaacaacaaaataaaaactttacctttaag
tgccatagagagggcagcgagatatactcagtcaactctctgaactttcatccagtgcat
cacacatttgctactgctggttctgatggttctttcaatttttgggataaagatagcaaa
cagagactaaaggcaatgtcaaggtgcaatcaacctataccttgcagtacattcaacaat
gatggttccatatttgcatatgcggtttgctatgattggagcaagggtgcagaaaatcat
aatccagctaacgccaaaaactacattttcctccatgtgccacaggaagctgaggttaag
agcaaaccacgagtcaacactggtggaaaaaggtga
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integrated database retrieval system