KEGG   Prunus avium (sweet cherry): 110755528
Entry
110755528         CDS       T05161                                 
Name
(RefSeq) protein RAE1-like
  KO
K14298  mRNA export factor
Organism
pavi  Prunus avium (sweet cherry)
Pathway
pavi03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:pavi00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    110755528
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pavi03019]
    110755528
   03036 Chromosome and associated proteins [BR:pavi03036]
    110755528
Messenger RNA biogenesis [BR:pavi03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     110755528
Chromosome and associated proteins [BR:pavi03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    110755528
SSDB
Motif
Pfam: Beta-prop_THOC3 WD40 WD40_Prp19 Beta-prop_WDR5 Beta-prop_WDR3_1st WD40_WDHD1_1st Beta-prop_EML_2 WD40_CDC20-Fz WDR55 Beta-prop_WDR3_2nd Beta-prop_RIG_2nd Beta-prop_WDR36-Utp21_1st Beta-prop_TEP1_2nd Beta-prop_WDR36-Utp21_2nd Beta-prop_EML WD40_Gbeta EIF3I ANAPC4_WD40 Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_C Beta-prop_DCAF12 Beta-prop_Aladin Beta-prop_ACSF4 Beta-prop_HPS5 Beta-prop_SPT8 Beta-prop_EIPR1 Beta-prop_IFT122_1st WD40_MABP1-WDR62_2nd WD40_RFWD3 Beta-prop_WDR75_1st Beta-prop_WDR19_1st WDR90_beta-prop_4th Beta-prop_BBS7
Other DBs
NCBI-GeneID: 110755528
NCBI-ProteinID: XP_021812449
UniProt: A0A6P5S9C5
LinkDB
Position
Unknown
AA seq 351 aa
MSSFMAAANVNSNSNPNPNKSFEVAQPPNDSISSLSFSPKSNILVATSWDNQVRCWEILQ
SGTNLASQPKAAISHDHPVLCSTWKEDGTTVFSGGCDKQVKMWPLGGQPVTVAMHDSPIK
EIAWIPEMSLLVTGSWDKTMKYWDVRQPNPVHTQQLPERCYALSVRYPLMVVGTADRNLI
VFNLQNPQTEFKRILSPLKYQTRCVAAFPDQQGFLVGSIEGRVGVHHLDEQQQNKNFTFK
CHREGSEIYSVNSLNFHPVHHTFATAGSDGSFNFWDKDSKQRLKAMSRCNQPIPCSTFNN
DGSIFAYAVCYDWSKGAENHNPANAKNYIFLHVPQEAEVKSKPRVNTGGKR
NT seq 1056 nt   +upstreamnt  +downstreamnt
atgtcgagtttcatggctgctgcaaatgtaaattcgaattcaaatccaaatccaaacaag
tcctttgaggtcgctcaacctccaaacgactccatatcaagcctaagtttcagtccaaag
agcaacattctggtcgccacctcctgggacaaccaggtgcgatgctgggagatactccag
agcggaacaaatcttgccagtcagcccaaggcagcgatatcccatgaccatccggttttg
tgctcaacttggaaagaggatggaacgaccgtgttctctggaggttgcgacaagcaagtt
aagatgtggcctttgggtggccagccagtaactgttgccatgcatgattcacccattaaa
gagattgcttggatccctgagatgagcctcttagtcacaggaagctgggacaagactatg
aagtattgggatgtgaggcagccaaatccagtgcatacccaacaactacctgagcgctgt
tatgctttatcggtgagataccctctaatggttgttggcacagcagacagaaatctgatt
gtttttaacttgcagaatccacagactgaattcaagagaattctttcgcccctcaagtat
caaacaaggtgtgttgctgcatttcctgatcagcaaggattcttggttggctctattgaa
gggagggttggcgtacatcatctggatgaacaacaacaaaataaaaactttacctttaag
tgccatagagagggcagcgagatatactcagtcaactctctgaactttcatccagtgcat
cacacatttgctactgctggttctgatggttctttcaatttttgggataaagatagcaaa
cagagactaaaggcaatgtcaaggtgcaatcaacctataccttgcagtacattcaacaat
gatggttccatatttgcatatgcggtttgctatgattggagcaagggtgcagaaaatcat
aatccagctaacgccaaaaactacattttcctccatgtgccacaggaagctgaggttaag
agcaaaccacgagtcaacactggtggaaaaaggtga

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