Prunus avium (sweet cherry): 110755579
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Entry
110755579 CDS
T05161
Name
(RefSeq) polypyrimidine tract-binding protein homolog 1 isoform X1
KO
K14948
polypyrimidine tract-binding protein 2
Organism
pavi
Prunus avium (sweet cherry)
Brite
KEGG Orthology (KO) [BR:
pavi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pavi03041
]
110755579
Spliceosome [BR:
pavi03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
110755579
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_8
DUF4523
Motif
Other DBs
NCBI-GeneID:
110755579
NCBI-ProteinID:
XP_021812500
UniProt:
A0A6P5S686
LinkDB
All DBs
Position
Unknown
AA seq
482 aa
AA seq
DB search
MSTSGTPQFRYTQTPSKVLHLRNLPWECAEEELIELCKPFGKIVNTKCNVGANRNQAFVE
FADLNQAINMVSYYASSSEPAQVRGKTVYIQYSNRHEIVNNKSPGDVPGNVLLVTIEGVE
AGDVSIDVIHLVFSAFGFVHKIATFEKAAGFQALIQFNDAETASSARNALDGRSIPRYLL
PEHVGSCHLRISYSAHTDLNIKFQSHRSRDYTNPYLPVNPTAIEGIMQPAVGPDGKKKEL
ESNVLLASIENMQYAVTVDVLHTVFSAFGTVQKIAIFEKNGQTQALVQYPDVNTAAVARE
ALEGHCIYDGGYCKLHLSYSRHTDLNVKAFSDKSRDYTIPEASLLAAQQVSGYPAAPAAW
QNPQAAPMYHGNEFSGAASMQAQGPPGQGPSWDPAMQAGRSTFVSVPSTFPGQTFHASSG
PVYSSAAMPPGSSPLQTGPTTSSSMASRGISQPGGPPNLRPGGGASPPGVGPPGASPSYY
GQ
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacctcggggacgccgcagtttcggtacacgcagaccccgtctaaggtgctccac
ctccggaacctgccatgggagtgcgccgaagaggagctcatcgagctctgcaagccgttt
ggcaagatcgtcaacaccaagtgcaatgttggagccaaccgcaaccaagctttcgtcgaa
tttgctgacctaaaccaggccataaatatggtttcatattatgcttcatcctcagagcct
gcacaggtccgtggtaagactgtttacattcagtattcaaatagacacgaaatcgtcaac
aacaaaagtcctggagatgttcccggaaatgtcttgttggtcaccattgagggtgttgaa
gctggcgatgtgagcatcgatgttattcacttggtgttttctgcttttggctttgtgcac
aagattgctacgtttgaaaaagcagcaggcttccaggcattgattcagttcaatgatgct
gaaactgcatcttcagcaaggaatgccttggatggaagaagtatacccaggtatttgctt
ccagagcatgttggttcgtgccacttacgtatttcatattccgcacacactgatttgaac
atcaagttccagtctcaccgaagcagggactatacaaatccgtaccttcctgtaaatcct
actgcaatagagggaattatgcagcctgctgtaggtcctgatggaaagaagaaagaactt
gagagtaatgtgcttcttgcttcaatcgaaaatatgcagtatgctgtcactgtggatgtt
cttcacacggtattttctgcatttggcactgtccagaaaattgctatatttgagaagaat
ggtcaaacacaggcattggttcaataccctgatgtcaataccgcagcagttgcaagggaa
gctttagagggacactgcatatatgatggtggctattgtaagcttcatctatcatactct
cgtcatactgatctcaatgtaaaggcttttagtgacaaaagtagagattatacaatccca
gaagctagtttgcttgcggcgcagcaagtttctggttaccctgctgccccagcagcttgg
cagaatccccaggctgctccgatgtaccatgggaatgagttcagtggtgcagcttctatg
caggcccaagggcctccagggcaagggccatcatgggatccagccatgcaggcgggcaga
tcaacatttgtttcagttccgagcacatttcctggtcaaacatttcatgcgtcctcaggt
ccagtatattcctctgcagcaatgccgccgggttcttcacctctccaaacaggcccaact
acttcctccagtatggcttctaggggaatatctcagccaggtggtccgcccaacttgcga
cctgggggtggtgcttcacctccaggagttggacctcctggtgcctcaccatcctactat
ggccaataa
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