Prunus avium (sweet cherry): 110755772
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Entry
110755772 CDS
T05161
Name
(RefSeq) tRNA:m(4)X modification enzyme TRM13 homolog
KO
K15446
tRNA:m4X modification enzyme [EC:
2.1.1.225
]
Organism
pavi
Prunus avium (sweet cherry)
Brite
KEGG Orthology (KO) [BR:
pavi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pavi03016
]
110755772
Enzymes [BR:
pavi01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.225 tRNA:m4X modification enzyme
110755772
Transfer RNA biogenesis [BR:
pavi03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
110755772
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRM13
zf-TRM13_CCCH
zf-U11-48K
Methyltransf_32
Methyltransf_31
Methyltransf_25
Methyltransf_12
Methyltransf_11
Motif
Other DBs
NCBI-GeneID:
110755772
NCBI-ProteinID:
XP_021812742
UniProt:
A0A6P5SEF5
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All DBs
Position
Unknown
AA seq
464 aa
AA seq
DB search
METRCKFWLPKKKRFCANIPLNESLFCGNHTPRSDSQWIPCPIDPSHSVLKENLEGHVRR
CPLLKQVQSLTLQPFYQKGINAGKEEDQEELETFRPEGADDLESSNDPVSGSLDNILSEM
KRNAVYSMTVLDFYKLIEKIEHVHESICKDIQDSYKVPEACGIWIKREVDRKLPFQEKHV
MQQVSILGNLEGLGVLKSSLGKERADYDDGTGIPAVVEFGAGRGYLTQMLADCYGIKKVF
LVERKSYKLKADRSLRQKESLILQRLRIDIEDLNLNAVESLREDPYIAIGKHLCGPATDL
TLRCCLGEHCNQSNAELQSVNPNLRGVAIATCCHHLCQWKHYINKKYLLELGISKEEFHA
ITWFTSWAVDADHGADLPDVTDCKLHLESIEKKQCGEDYGVDDIVRNMKAVERAVLGFIC
KKIIDMGRLMWMKEHGLDAEFVKYVPSSVSPENHLLIGRCPNHL
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atggagactcgatgcaaattttggcttcctaaaaagaagagattttgtgcaaatatcccc
ctcaacgaatctttattctgtggcaaccacacacccaggtccgatagccagtggattcca
tgcccaatagacccttctcactctgtacttaaagagaatcttgaaggacatgttagaaga
tgcccattactcaaacaagtgcagtctttgactctccaacccttttaccaaaaaggtatc
aatgctggcaaagaagaggaccaagaagaattagaaacattcagacccgaaggagctgat
gatttggaatcttctaatgaccccgtgtcggggtctttggataacattctttcagaaatg
aagaggaatgctgtttatagtatgactgtacttgatttctataaattaattgagaaaatt
gagcatgttcatgaatctatatgcaaggatattcaggactcatataaggtaccggaagct
tgtgggatatggattaaacgagaggttgacagaaaattgccatttcaagagaaacatgtt
atgcagcaggtgtccattcttgggaacttggaagggcttggtgtattgaagagttctcta
ggaaaggagagggcagattatgatgatggcactggtatccctgcggtggttgagtttgga
gccgggaggggatacttgacacagatgctggcagattgttatgggataaaaaaggtcttt
ctggttgaaagaaaatcatacaagttaaaggcagatcgatccttgcgacagaaagagagc
ttgatattgcaacgtttgagaattgacattgaggatttaaacttgaatgccgttgagtca
ttgcgggaagatccttacattgctattggtaaacatctttgtgggcctgcaacagacctg
actttgagatgttgccttggtgaacactgtaatcaaagtaatgctgaattgcagagtgtt
aacccaaacctgagaggtgtagctatagcaacatgctgccatcatctctgccagtggaag
cactacataaataagaaatatctattagagttgggaatctcaaaagaggaatttcatgca
attacttggtttactagttgggctgtagatgctgatcatggtgccgatctcccagatgtt
actgattgcaaattgcatcttgaatctattgaaaagaagcaatgcggtgaggattatgga
gttgatgacattgtgagaaatatgaaggcagttgaaagggctgtgttagggtttatttgc
aagaagattatagatatgggtaggttgatgtggatgaaggaacatggcttagacgcagag
tttgtcaaatacgtcccatccagcgtttctcctgaaaaccatctattgattggtagatgc
ccaaatcatttgtga
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