KEGG   Prunus avium (sweet cherry): 110755793
Entry
110755793         CDS       T05161                                 
Name
(RefSeq) protein ANTHESIS POMOTING FACTOR 1 isoform X1
  KO
K14962  COMPASS component SWD2
Organism
pavi  Prunus avium (sweet cherry)
Pathway
pavi03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:pavi00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    110755793
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pavi03019]
    110755793
   03036 Chromosome and associated proteins [BR:pavi03036]
    110755793
Messenger RNA biogenesis [BR:pavi03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     110755793
Chromosome and associated proteins [BR:pavi03036]
 Eukaryotic type
  Histone modification proteins
   HMT complexes
    COMPASS/SET1 complex
     110755793
    COMPASS/SET1 complex (yeast)
     110755793
SSDB
Motif
Pfam: Beta-prop_WDR5 Beta-prop_THOC3 Beta-prop_IFT122_1st Beta-prop_WDR3_1st WD40_Prp19 WD40 Beta-prop_EML_2 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_WDR36-Utp21_2nd Beta-prop_CAF1B_HIR1 Beta-prop_WDR3_2nd WD40_Gbeta WDR55 ANAPC4_WD40 EIF3I Beta-prop_WDR90_POC16_2nd Beta-prop_EML WD40_MABP1-WDR62_2nd Beta-prop_TEP1_2nd Beta-prop_WDR75_1st Beta-prop_WDR36-Utp21_1st Beta-prop_TEP1_C WDR90_beta-prop_4th WD40_RFWD3 Beta-prop_SPT8 Beta-prop_DCAF12 Beta-prop_NOL10_N NBCH_WD40 TRM82_WD CFAP251_N Beta-prop_NUP159_NUP214 Beta-prop_ACSF4 PAC11 Beta-prop_SCAP Beta-prop_NWD2_C WD_LRWD1 Beta-prop_VPS8 Tricorn_2nd PD40
Other DBs
NCBI-GeneID: 110755793
NCBI-ProteinID: XP_021812769
UniProt: A0A6P5SA69
LinkDB
Position
Unknown
AA seq 340 aa
MKTPMTQLDDETVRSMAIGAVFSDFGGKINSLDFHRKDDLLVTASEDDSVRLYDIATAKL
LKTTFHKKHGADRICFTHHPSSVICSSKYNLDATGAESLRYLSMYDNRCLRYFKGHKERI
VSLCMSPVNDSFMSGSLDHTVRIWDLRVNACQGILHLRGRPTVAYDQQGLVFAVAMEGGA
IKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSSDGKSMLLTTTNNNIYILDAYGGEKRCG
YSLEPSPNVIIEATFTPDGQYVVSGSGDGNLHAWSINKRSEQVACWNSHIGVPSCLKWAP
RRAMFAAASSVLTFWIPNDSNAEPTRMDTEAGVEAEHPSQ
NT seq 1023 nt   +upstreamnt  +downstreamnt
atgaagacgccgatgacacagctcgacgacgaaacggtgcgcagcatggccattggagcc
gttttctcagactttggtgggaagataaattcactggattttcaccgcaaggatgattta
ctggttacggctagcgaggatgattctgtgcgactctatgacattgcaactgctaagttg
ctaaagaccacattccataagaaacatggagcagatcgtatatgctttacccatcaccca
agttctgttatatgctcttcaaaatacaatctggatgccactggagcagaatcactgcgg
tatctgtcaatgtatgataatcgatgccttcgctacttcaaaggacataaagagagaatt
gtttccctctgtatgtcaccagtcaacgatagcttcatgtctggttcgttggaccacact
gtcagaatatgggatctccgtgtaaatgcctgccagggaattttgcatctacgtggtaga
cctacagttgcctatgaccagcaaggtcttgtttttgctgtggcaatggaagggggtgcg
attaaattgtttgattcacgttcctacgacaagggtccatttgatacctttttagttggt
ggagatactgctgaagtttgtgatatcaagtttagcagtgatggcaaatcaatgctcttg
acaaccacaaacaacaacatctatattctggacgcatatggaggagagaagcgctgtggg
tacagtttggaaccatctcctaacgtaataatagaggcaacttttaccccagatggccag
tatgtcgtgtcaggctctggagatggaaacttgcatgcctggagcatcaacaagcggagc
gagcaggtggcatgctggaacagtcacattggagttccatcttgcttgaagtgggctccc
cgcagggccatgtttgctgctgcatcatcggttcttaccttttggatacctaacgactca
aacgccgagccgactcgcatggacaccgaagccggtgttgaagccgagcatccttctcag
taa

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