Prunus avium (sweet cherry): 110755856
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Entry
110755856 CDS
T05161
Name
(RefSeq) serine/arginine-rich splicing factor SC35-like isoform X1
KO
K12891
serine/arginine-rich splicing factor 2/8
Organism
pavi
Prunus avium (sweet cherry)
Pathway
pavi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pavi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110755856
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pavi03041
]
110755856
Spliceosome [BR:
pavi03041
]
Common components
Common spliceosomal components
SR proteins
110755856
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_Nup35
Motif
Other DBs
NCBI-GeneID:
110755856
NCBI-ProteinID:
XP_021812836
UniProt:
A0A6P5SAD1
LinkDB
All DBs
Position
Unknown
AA seq
306 aa
AA seq
DB search
MYLQSGNRNDSSRKFYSTLQIYSPQIQTLIPISLSLSHRARTMSHFGRSGPPDIADTYSL
LVLNITFRTSADDLFPLFDKYGKVVDIFIPRDRRTGESRGFAFVRYKYADEAQKAVERLD
GKVVDGREITVQFAKYGPNAERIQKGRITEALPKSRYRSRSRSPRRRYRDDYRDRDYRRR
SRSRSLDRYDRDRYHGRDRDYRRRSRSRSASPDYYRSRRRGRYDDERRSRSRSRSPIRSR
SIDSVSPARRSPSPHKSPSPLIRSRSATPDRRSRDGHSPTSRSVSPRHRPADSHTPSPRN
SDVDVS
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atgtatttgcagtcggggaaccgcaacgattcttcaagaaagttctattctaccctccaa
atttactcgccacaaatccaaaccctaatcccaatctctctctctctctctcacagagca
agaaccatgtctcactttggtaggtccggccctcctgacatcgctgacacctactctctc
ctggtcctcaacataaccttccgtacgagcgctgatgatctgtttccgcttttcgataag
tatggcaaagttgtcgacattttcatccccagagaccgaaggactggcgagtctaggggt
tttgcttttgtgcgatacaaatatgccgatgaagcacagaaagcagttgaaaggctcgat
ggaaaagttgttgatggtcgagagataactgttcagtttgcaaaatatgggccaaatgcg
gagaggattcagaaaggaaggattactgaagctctaccaaaatcaaggtacaggtcaaga
agtcgcagtcctcggagaaggtaccgagatgactacagagaccgggactacaggaggaga
agtcgcagcaggagtttggataggtatgaccgtgacagataccatgggagggacagagac
tatcgtcgacgaagcaggagccgcagtgccagccctgattactataggagcaggagaaga
gggcgctatgatgatgaaaggcggagtcgaagtcgaagtaggagtccaattcgaagtcgt
tccattgatagtgtctctcctgctcggcgtagccctagtcctcataagagtccttcccca
ctaatcaggagccgcagtgccacccctgatagacgtagtcgcgatggacattcccctact
tctcgaagtgtttcaccacgccatcgtcctgctgattctcataccccatcccctcgaaat
tcagatgttgatgtgagttga
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