Prunus avium (sweet cherry): 110755879
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Entry
110755879 CDS
T05161
Name
(RefSeq) probable polygalacturonase At3g15720
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
pavi
Prunus avium (sweet cherry)
Pathway
pavi00040
Pentose and glucuronate interconversions
pavi01100
Metabolic pathways
Module
pavi_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
pavi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
110755879
Enzymes [BR:
pavi01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
110755879
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Ortholog
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GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Beta_helix
Pectate_lyase_4
Motif
Other DBs
NCBI-GeneID:
110755879
NCBI-ProteinID:
XP_021812874
UniProt:
A0A6P5SAG5
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All DBs
Position
Unknown
AA seq
721 aa
AA seq
DB search
MKNILVLILIFWSGFGHGQRTFDVLKYGAAGDGKTDDSKAFLKAWGELCRAAYEPNGVPT
LVIPGTKAFLLQPIKFQGPCNSNGVHVQIMGKLVAPKMLDARTDCESDSDWLQFKDVGNL
VVDGSGEIDGQGSSWWTTPNQYDRLSRKLMMNNQNCKAPDALHFHGCDNLKLSGLTHLNS
GRAHIAISGCNNVYVSHLTITAPEDSPNTDGIDISNSHNVFIHHSTIGTGDDCIAINGGC
SDLNIANIACGPGHGISVGSLGAHGALEKVKNVYVRDSSFSGTTNGARIKTWQGGSGYAR
NITFEKITLHAAKNPIIIDQFYCNHAHNCKSQASALLVEDVKYIDFEGTSANEEAIKLDC
DQNSGCRNIVMDRIKITSAVPDKKIYASCNNAIGTSIGTIVPNVPCLKSGTEPTTSPPAT
PLPTMPPPAMPLPSPPLPVMPLPSPPVPVMPLPSPPVPVIPLPSPPVPVMPPPSPPVPVM
PPLSPPVPVILPPSPPAPVILPPSPLMPVMPPPSPPAPVIPPPSPLVPVMPPPSPPVPAA
PPLTLILPATPPPALPLPDTPPPLPATPPPCPLLPATPPQSPPLPATPPQFPPLPATPPQ
SPPLPATPPSSPPMPATPPSSPPLPATPPPLQVMPPPLLNRPRPTLPLPTTPPPAPLLTP
LVPTPPPSTLPAIPQMSYTGEPGVPDIYFTPGASSATKLHKKHYIWCQLLIVYVLTRLLF
G
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atgaagaacatacttgttttgattttgatattctggagtggttttggacatggccaaaga
acattcgatgttctcaagtacggtgctgctggagatggaaaaactgacgattccaaggct
tttctaaaagcatggggagagttgtgtagagcagcatatgaacctaatggcgtgccaaca
cttgttatacctgggacgaaagcattcttattgcaacccatcaaatttcaaggtccttgc
aactcaaatggtgttcatgttcagatcatgggcaaactggtggcacctaaaatgttggat
gcacggaccgactgtgaatcagattcagattggctccaatttaaggatgtgggcaatctc
gtagtcgatggttcaggtgaaatcgacggtcagggttcatcttggtggaccactcccaac
caatacgacagattatcacgcaaactcatgatgaataaccagaattgcaaagcaccagat
gctctgcacttccatggatgcgataatcttaaactaagcggacttactcatctaaacagc
ggaagagcccacattgctataagcgggtgcaacaatgtgtacgtgtctcatctcaccata
accgcaccggaagacagtccaaacactgatggcatcgacatctcaaactcacacaacgtc
ttcattcaccactctactatcggaaccggcgatgactgcatagccatcaacggtggctgc
tctgatctcaacattgccaacatcgcgtgcgggccgggtcatggtattagtgtgggaagc
ttgggagcgcatggggctcttgagaaagtgaaaaatgtgtacgtgagagatagtagtttc
agtgggactacaaatggagctaggatcaagacatggcagggcggatcggggtacgctagg
aacataacctttgagaagatcacactccatgcagctaaaaatcccatcatcattgaccag
ttttattgtaatcatgctcacaactgtaaaagtcaggcctcggctctgttggtggaagat
gtgaagtacattgattttgaaggaacatctgcgaatgaggaggcgatcaaattagattgt
gaccagaattcaggttgccgcaacattgtaatggaccgcatcaaaatcacctcggcggtt
cctgataagaagatttatgcttcttgcaacaatgctattggaacttccattggcaccatt
gtgcccaatgtaccttgcctcaagtcagggactgaaccaactacttctccgccagctacg
cctttgccaactatgcctcctccagctatgcctctgccatctccgcctttgcccgttatg
cctctaccatctccgcctgtgcccgttatgcctctgccatctccgcctgtgcccgttata
cctctaccatctccgcctgtgcccgttatgcctccaccatctccccctgtgcccgttatg
cctccgctatctccgcctgtgcccgttattcttccgccatctccgcctgcgcccgttatt
cttccgccatctccgcttatgcccgttatgcctccgccatctccgcctgcgcccgttatc
cctccgccatctccgcttgtgcccgttatgcctccgccatctccgcctgtgccggctgca
cctccactaactcttattttgccagctactcctccgccagctctacccttgccagatacg
cctccgcccctgccagctacgcctcctccatgtccgctcctaccggccacgcctccgcag
tctccgcccttgccagctacgcctccgcaatttccacccttgccagctacacctccacaa
tctccgcccttgccagctacgcctccgtcatctccacccatgccagctacgcctccgtca
tctccacccttgccagctacgcctccgcctctacaggttatgcctccgcctttgctaaat
aggcctcgcccaactctgcctttgccaactacacctccaccagctcctttgcttactccg
ttggtaccaactccgcctccctcaactctgccagcaataccacaaatgtcatacacaggg
gaaccaggagtgccagatatttacttcacacctggtgcatctagtgctactaaacttcat
aagaaacactatatttggtgtcaattattgatcgtgtatgtgttaacaagactactgttt
ggctaa
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