Prunus avium (sweet cherry): 110756024
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Entry
110756024 CDS
T05161
Name
(RefSeq) pectate lyase-like
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
pavi
Prunus avium (sweet cherry)
Pathway
pavi00040
Pentose and glucuronate interconversions
pavi01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pavi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
110756024
Enzymes [BR:
pavi01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
110756024
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Paralog
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
110756024
NCBI-ProteinID:
XP_021813089
UniProt:
A0A6P5SB28
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All DBs
Position
Unknown
AA seq
405 aa
AA seq
DB search
MAGLSLLLLFLIITCFLTATLASSSQLHDPELVAQEVHRSINASRRNLGYLSCGTGNPID
DCWRCDPNWEQNRQRLADCAIGFGKDAIGGRNGRIYVVTDSGDDDPVNPRPGTLRHAVIQ
DEPLWIIFKRDMVVQLKQELVMNSFKTIDGRGASVHIAGGPCITIHYATNIIIHGINIHD
CKQAGNGNIRNSPEHSGWWTISDGDGVSIFGGKHIWVDHCSLSNCHDGLIDAIHGSTAIT
ISNNYMTHHDKVMLLGHSDSYTQDKGMQVTVAFNHFGEGLVQRMPRCRHGYFHVVNNDYT
HWEMYAIGGSAAPTINSQGNRFLAPNTRFNKEVTKHENAPESEWRGWNWRSEGDMMLNGA
YFRQSGAGASSSYARASSLSARPSSLVGSITTTAGALICRKGSRC
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atggctgggctctcacttttgcttcttttcctcatcatcacttgtttcctaactgcaact
ttggcttcctcctcacaacttcatgaccctgaactggtagcacaggaagtccataggagc
atcaatgcttctaggaggaacttgggctacttgtcatgtggaactggcaaccccatagac
gattgctggaggtgtgatcccaactgggaacaaaaccgccagcgcttagccgactgcgcc
attgggttcggcaaggacgccatcggaggaagaaacggtcgaatctacgtagtcaccgac
tctggagacgacgacccagtgaaccctagacccggaaccctaagacacgcagtgatccaa
gacgagccattgtggattatattcaaaagggacatggtggttcaactgaagcaagagctc
gtgatgaactcgttcaagaccatagacggtagaggagcgagcgtccacatagctggaggg
ccatgcatcaccatccattatgccaccaacatcatcatccatggcatcaacatccatgac
tgtaagcaggcagggaacgggaacatacgaaactcgccggagcattcagggtggtggacg
atatcggatggcgatggggtgtccatatttggtgggaaacatatatgggtggaccattgc
tctctctctaattgccatgatggcctcattgatgccatccatggatccacagccatcacc
atatccaataactacatgacccatcatgataaggtcatgcttttggggcacagcgattcc
tatacgcaagacaagggcatgcaggtcacagttgcctttaatcattttggagaaggcctt
gtccaaagaatgccaaggtgtagacatggatattttcatgtggtgaacaatgactacaca
cactgggaaatgtatgcaattggagggagtgcagctccaactatcaacagccaaggcaat
agatttctggcgcctaatacacgtttcaataaagaggtgactaaacatgagaatgcaccg
gagagtgagtggaggggttggaactggaggtcagagggggatatgatgttgaacggggca
tatttcaggcagtcaggagcaggagcatcttcaagctacgccagggcttcaagcctcagt
gcaaggccttcttctctggtgggctccatcacaactactgccggtgcccttatttgcagg
aagggatcccgctgctaa
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